DendSer

1.0.3

Dendrogram Seriation: Ordering for Visualisation

9packages depend

63.9Kdownloads / year

–test coverage

13/13checks pass

Overview

About

Maintained by Catherine HurleyFirst published 2013-05-024 releasesCRAN page ↗

Re-arranges a dendrogram to optimize visualisation-based cost functions. The methods implemented here are described in "Advances in Dendrogram Seriation for Application to Visualization", Journal of Computational and Graphical Statistics (2015) D. Earle and C.B. Hurley doi:10.1080/10618600.2013.874295.

Install

R (CRAN)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("DendSer", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-dendser

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-DendSer

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-DendSer

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

13OK

Slowest check: 2.4 min · r-oldrel-macos-x86_64

Code health

None

Tests · ratio 0.00

not tracked

Coverage

100%

Documentation · exports

Dependencies · direct

Check history

OK2026-04-25
12 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
NOTE2026-03-10
11 OK · 3 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMENoVignettesYes · dynamicpkgdown siteNoNEWSYes · 67% structuredCode of conductNoContributing guideNo

Examples that run: 100%
Documented parameters: 92%
Return-value docs: 60%
References docs: 17%

Downloads

63.9K

CRAN downloads in the past year

Rank #1,950 · ~175/day · ~5.3K/mo

Releases R versions

Daily download trend is not available in this view yet.

2.5K30 days

12.8K90 days

63.9K1 year

Compare downloads with other packages →

Also on528 r2u41 autocran

Dependencies

Declared dependencies

9 external dependencies (excludes base and recommended)

Depends (0)

none

Imports (5)

gclusgraphicsseriationstatsutils

LinkingTo (0)

none

Suggests (7)

HSAUR2 Iyer517 RColorBrewer mvtnorm scagnostics knitr rmarkdown

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

9direct

0indirect

bartMan bullseye condvis2 corrViz vivid condvis dendextend idendr0 seriation

Code & Tests

Code Composition

R 1,021 (56%)Vignettes 367 (20%)Rd 340 (19%)C 106 (6%)

Code characteristics

Object systems

S34

Cyclomatic complexity: 2.0 median / 41 max

Test coverage

Line coverage

–

Expression

–

Tests / Examples

–

Functions

39 10 exported

Complexity

4.5 avg / 41 max

Call network

39 nodes / 20 edges

Call graph

Open call graph →

Loading call graph…

Lowest coverage

Per-function coverage is not measured for this package yet.

People & History

People (3)

Maintainer (1)

Catherine Hurley

Maintainer · added in 1.0.3

Authors (2)

Denise Earle

Author

Catherine B. Hurley

Author

Listed in earlier versions (1)

Hurley

no longer listed · 1.0.3

Package Timeline

4 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
1.0.3Latest
2026-02-13 · current release · diff ↗
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
R
R 4.3.0 released · 2023-04-21
1.0.2
2022-04-27 · diff ↗
R
R 4.2.0 released · 2022-04-22
R
R 4.1.0 released · 2021-05-18
R
R 4.0.0 released · 2020-04-24
R
R 3.6.0 released · 2019-04-26
R
R 3.5.0 released · 2018-04-23
R
R 3.4.0 released · 2017-04-21
R
R 3.3.0 released · 2016-05-03
R
R 3.2.0 released · 2015-04-16
R
R 3.1.0 released · 2014-04-10
1.0.1
2013-09-09 · diff ↗

Show 2 earlier events

1.0.0
2013-05-02
R
R 3.0.0 released · 2013-04-03

Package metadata

First published: 2013-05-02
Total releases: 4 / 13 yrs
License: GPL-2 OSI
Download size: 473 KB
Installed size: not tracked yet
With dependencies: not tracked yet

Report a problem with this page →