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ClustAssess

Tools for Assessing Clustering

v1.1.0 · May 27, 2025 · MIT + file LICENSE

Description

A set of tools for evaluating clustering robustness using proportion of ambiguously clustered pairs (Senbabaoglu et al. (2014) <doi:10.1038/srep06207>), as well as similarity across methods and method stability using element-centric clustering comparison (Gates et al. (2019) <doi:10.1038/s41598-019-44892-y>). Additionally, this package enables stability-based parameter assessment for graph-based clustering pipelines typical in single-cell data analysis.

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CRAN Check Status

3 NOTE
11 OK
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r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-macos-arm64 OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 NOTE
r-oldrel-macos-x86_64 NOTE
r-oldrel-windows-x86_64 NOTE
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK
Check details (14 non-OK)
OK r-devel-linux-x86_64-debian-clang

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OK r-devel-linux-x86_64-debian-gcc

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OK r-devel-linux-x86_64-fedora-clang

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OK r-devel-linux-x86_64-fedora-gcc

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OK r-devel-macos-arm64

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OK r-devel-windows-x86_64

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NOTE r-oldrel-macos-arm64

package dependencies

Packages suggested but not available for checking:
  'monocle3', 'SharedObject'
NOTE r-oldrel-macos-x86_64

package dependencies

Packages suggested but not available for checking:
  'monocle3', 'SharedObject'
NOTE r-oldrel-windows-x86_64

package dependencies

Package suggested but not available for checking: 'monocle3'
OK r-patched-linux-x86_64

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OK r-release-linux-x86_64

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OK r-release-macos-arm64

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OK r-release-macos-x86_64

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OK r-release-windows-x86_64

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Check History

NOTE 11 OK · 3 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 9, 2026
NOTE r-oldrel-macos-arm64

package dependencies

Packages suggested but not available for checking:
  'monocle3', 'SharedObject'
NOTE r-oldrel-macos-x86_64

package dependencies

Packages suggested but not available for checking:
  'monocle3', 'SharedObject'
NOTE r-oldrel-windows-x86_64

package dependencies

Package suggested but not available for checking: 'monocle3'

Dependency Network

Dependencies Reverse dependencies dplyr DT fastcluster foreach glue Gmedian ggnewscale ggplot2 ggrastr ggrepel ggtext gprofiler2 igraph jsonlite leiden +17 more dependencies ClustAssess

Version History

new 1.1.0 Mar 9, 2026