Bioconductor Packages

4,656 packages in the Bioconductor catalogue.

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4,656

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3,810

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All (4,656) Software (2,418) Annotation (928) Experiment (436) Workflows (28)

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ChipManufacturer404 ChipName197 CustomArray2 CustomCDF0 CustomDBSchema10 FunctionalAnnotation30 Organism672 PackageType655 SequenceAnnotation5 WorkflowStep1,321 BiologicalQuestion1,034

Current releases only – show all

Showing 1–31 of 31 packages

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Package	Category	Version	First Release	Last Release	Status
AHEnsDbs Bioc EnsDbs for AnnotationHub	annotation	1.7.0	3.15	3.23	current
AHLRBaseDbs Bioc LRBaseDbs for AnnotationHub	annotation	1.8.0	3.15	3.23	current
AHMeSHDbs Bioc MeSHDbs for AnnotationHub	annotation	1.8.0	3.15	3.23	current
AHPathbankDbs Bioc Metabolites and proteins linked to PathBank pathways (for AnnotationHub)	annotation	0.99.5	3.15	3.23	current
AHWikipathwaysDbs Bioc Metabolites linked to WikiPathways pathways (for AnnotationHub)	annotation	0.99.4	3.15	3.23	current
CTCF Bioc Genomic coordinates of CTCF binding sites, with orientation	annotation	0.99.14	3.15	3.23	current
DO.db Bioc A set of annotation maps describing the entire Disease Ontology	annotation	2.9		3.23	current
GO.db Bioc A set of annotation maps describing the entire Gene Ontology	annotation	3.23.1		3.23	current
HDO.db Bioc A set of annotation maps describing the entire Human Disease Ontology	annotation	1.0.0		3.23	current
HPO.db Bioc A set of annotation maps describing the entire Human Phenotype Ontology	annotation	0.99.2	3.18	3.23	current
JASPAR2018 Bioc Data package for JASPAR 2018	annotation	1.1.1	3.6	3.23	current
JASPAR2020 Bioc Data package for JASPAR database (version 2020)	annotation	0.99.10	3.15	3.23	current
JASPAR2022 Bioc Data package for JASPAR database (version 2022)	annotation	0.99.8	3.15	3.23	current
JASPAR2024 Bioc Data package for JASPAR database (version 2024)	annotation	0.99.7	3.18	3.23	current
LowMACAAnnotation Bioc LowMACAAnnotation	annotation	0.99.3		3.23	current
MPO.db Bioc A set of annotation maps describing the Mouse Phenotype Ontology	annotation	0.99.8	3.18	3.23	current
Orthology.eg.db Bioc Orthology mapping package	annotation	3.23.0		3.23	current
excluderanges Bioc Genomic coordinates of problematic genomic regions	annotation	0.99.11	3.15	3.23	current
geneplast.data Bioc Input data for the geneplast package via AnnotationHub	annotation	0.99.9	3.15	3.23	current
geneplast.data.string.v91 Bioc Input data for the geneplast package	annotation	0.99.6		3.23	current
hpAnnot Bioc Anotation package for Hipathia package	annotation	1.1.3	3.15	3.23	current
humanCHRLOC Bioc A data package containing annotation data for humanCHRLOC	annotation	2.1.6		3.23	current
metaboliteIDmapping Bioc Mapping of Metabolite IDs from Different Sources	annotation	1.0.0	3.15	3.23	current
miRBaseVersions.db Bioc Collection of mature miRNA names of 22 different miRBase release versions	annotation	1.1.0		3.23	current
mouseCHRLOC Bioc A data package containing annotation data for mouseCHRLOC	annotation	2.1.6		3.23	current
rGenomeTracksData Bioc Demonstration Data from rGenomeTracks Package	annotation	0.99.0	3.15	3.23	current
ratCHRLOC Bioc A data package containing annotation data for ratCHRLOC	annotation	2.1.6		3.23	current
reactome.db Bioc A set of annotation maps for reactome	annotation	1.96.0		3.23	current
scAnnotatR.models Bioc Pretrained models for scAnnotatR package	annotation	0.99.10	3.15	3.23	current
synaptome.data Bioc AnnotationData for Synaptome.DB package	annotation	0.99.6	3.15	3.23	current
synaptome.db Bioc Synamptosome Proteome Database	annotation	0.99.17	3.15	3.23	current