Bioconductor Packages

4,656 packages in the Bioconductor catalogue.

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TxDb50

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Showing 1–50 of 50 packages

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Package	Category	Version	First Release	Last Release	Status
FDb.UCSC.tRNAs Bioc Annotation package for FeatureDb object(s)	annotation	1.0.1		3.23	current
GenomicState Bioc Build and access GenomicState objects for use with derfinder tools from sources like Gencode	annotation	0.99.17	3.15	3.23	current
TxDb.Athaliana.BioMart.plantsmart22 Bioc Annotation package for TxDb object(s)	annotation	3.0.1		3.23	current
TxDb.Athaliana.BioMart.plantsmart25 Bioc Annotation package for TxDb object(s)	annotation	3.1.3		3.23	current
TxDb.Athaliana.BioMart.plantsmart28 Bioc Annotation package for TxDb object(s)	annotation	3.2.2		3.23	current
TxDb.Athaliana.BioMart.plantsmart51 Bioc Annotation package for TxDb object(s)	annotation	0.99.0		3.23	current
TxDb.Btaurus.UCSC.bosTau8.refGene Bioc Annotation package for TxDb object(s)	annotation	3.12.0		3.23	current
TxDb.Btaurus.UCSC.bosTau9.refGene Bioc Annotation package for TxDb object(s)	annotation	3.10.0		3.23	current
TxDb.Celegans.UCSC.ce11.ensGene Bioc Annotation package for TxDb object(s)	annotation	3.15.0		3.23	current
TxDb.Celegans.UCSC.ce11.refGene Bioc Annotation package for TxDb object(s)	annotation	3.4.6		3.23	current
TxDb.Celegans.UCSC.ce6.ensGene Bioc Annotation package for TxDb object(s)	annotation	3.2.2		3.23	current
TxDb.Cfamiliaris.UCSC.canFam3.refGene Bioc Annotation package for TxDb object(s)	annotation	3.11.0		3.23	current
TxDb.Cfamiliaris.UCSC.canFam4.refGene Bioc Annotation package for TxDb object(s)	annotation	3.14.0		3.23	current
TxDb.Cfamiliaris.UCSC.canFam5.refGene Bioc Annotation package for TxDb object(s)	annotation	3.14.0		3.23	current
TxDb.Cfamiliaris.UCSC.canFam6.refGene Bioc Annotation package for TxDb object(s)	annotation	3.17.0		3.23	current
TxDb.Dmelanogaster.UCSC.dm3.ensGene Bioc Annotation package for TxDb object(s)	annotation	3.2.2		3.23	current
TxDb.Dmelanogaster.UCSC.dm6.ensGene Bioc Annotation package for TxDb object(s)	annotation	3.12.0		3.23	current
TxDb.Drerio.UCSC.danRer10.refGene Bioc Annotation package for TxDb object(s)	annotation	3.4.6		3.23	current
TxDb.Drerio.UCSC.danRer11.refGene Bioc Annotation package for TxDb object(s)	annotation	3.4.6		3.23	current
TxDb.Ggallus.UCSC.galGal4.refGene Bioc Annotation package for TxDb object(s)	annotation	3.12.0		3.23	current
TxDb.Ggallus.UCSC.galGal5.refGene Bioc Annotation package for TxDb object(s)	annotation	3.12.0		3.23	current
TxDb.Ggallus.UCSC.galGal6.refGene Bioc Annotation package for TxDb object(s)	annotation	3.10.0		3.23	current
TxDb.Hsapiens.BioMart.igis Bioc Annotation package for TxDb object(s)	annotation	2.3.2		3.23	current
TxDb.Hsapiens.UCSC.hg18.knownGene Bioc Annotation package for TxDb object(s)	annotation	3.2.2		3.23	current
TxDb.Hsapiens.UCSC.hg19.knownGene Bioc Annotation package for TxDb object(s)	annotation	3.22.1		3.23	current
TxDb.Hsapiens.UCSC.hg19.lincRNAsTranscripts Bioc Annotation package for TxDb object(s)	annotation	3.2.2		3.23	current
TxDb.Hsapiens.UCSC.hg19.refGene Bioc Annotation package for TxDb object(s)	annotation	3.22.0		3.23	current
TxDb.Hsapiens.UCSC.hg38.knownGene Bioc Annotation package for TxDb object(s)	annotation	3.22.0		3.23	current
TxDb.Hsapiens.UCSC.hg38.refGene Bioc Annotation package for TxDb object(s)	annotation	3.19.0		3.23	current
TxDb.Mmulatta.UCSC.rheMac10.refGene Bioc Annotation package for TxDb object(s)	annotation	3.14.0		3.23	current
TxDb.Mmulatta.UCSC.rheMac3.refGene Bioc Annotation package for TxDb object(s)	annotation	3.12.0		3.23	current
TxDb.Mmulatta.UCSC.rheMac8.refGene Bioc Annotation package for TxDb object(s)	annotation	3.12.0		3.23	current
TxDb.Mmusculus.UCSC.mm10.ensGene Bioc Annotation package for TxDb object(s)	annotation	3.4.0		3.23	current
TxDb.Mmusculus.UCSC.mm10.knownGene Bioc Annotation package for TxDb object(s)	annotation	3.10.0		3.23	current
TxDb.Mmusculus.UCSC.mm39.knownGene Bioc Annotation package for TxDb object(s)	annotation	3.22.0		3.23	current
TxDb.Mmusculus.UCSC.mm39.refGene Bioc Annotation package for TxDb object(s)	annotation	3.19.0		3.23	current
TxDb.Mmusculus.UCSC.mm9.knownGene Bioc Annotation package for TxDb object(s)	annotation	3.2.2		3.23	current
TxDb.Ptroglodytes.UCSC.panTro4.refGene Bioc Annotation package for TxDb object(s)	annotation	3.12.0		3.23	current
TxDb.Ptroglodytes.UCSC.panTro5.refGene Bioc Annotation package for TxDb object(s)	annotation	3.12.0		3.23	current
TxDb.Ptroglodytes.UCSC.panTro6.refGene Bioc Annotation package for TxDb object(s)	annotation	3.10.0		3.23	current
TxDb.Rnorvegicus.BioMart.igis Bioc Annotation package for TxDb object(s)	annotation	2.3.2		3.23	current
TxDb.Rnorvegicus.UCSC.rn4.ensGene Bioc Annotation package for TxDb object(s)	annotation	3.2.2		3.23	current
TxDb.Rnorvegicus.UCSC.rn5.refGene Bioc Annotation package for TxDb object(s)	annotation	3.12.0		3.23	current
TxDb.Rnorvegicus.UCSC.rn6.ncbiRefSeq Bioc Annotation package for TxDb object(s)	annotation	3.12.0		3.23	current
TxDb.Rnorvegicus.UCSC.rn6.refGene Bioc Annotation package for TxDb object(s)	annotation	3.4.6		3.23	current
TxDb.Rnorvegicus.UCSC.rn7.refGene Bioc Annotation package for TxDb object(s)	annotation	3.15.0		3.23	current
TxDb.Scerevisiae.UCSC.sacCer2.sgdGene Bioc Annotation package for TxDb object(s)	annotation	3.2.2		3.23	current
TxDb.Scerevisiae.UCSC.sacCer3.sgdGene Bioc Annotation package for TxDb object(s)	annotation	3.2.2		3.23	current
TxDb.Sscrofa.UCSC.susScr11.refGene Bioc Annotation package for TxDb object(s)	annotation	3.12.0		3.23	current
TxDb.Sscrofa.UCSC.susScr3.refGene Bioc Annotation package for TxDb object(s)	annotation	3.12.0		3.23	current