Bioconductor Packages

A Curated ChIP-Seq Dataset of MDI-induced Differentiated Adipocytes (3T3-L1)

A Curated RNA-Seq Dataset of MDI-induced Differentiated Adipocytes (3T3-L1)

Bladder Cancer Gene Expression Analysis

Curated breast cancer gene expression data with survival and treatment information

Colorectal Cancer Gene Expression Analysis

Curated Prostate Cancer Data

Curation of existing tuberculosis transcriptomic studies

Cancer Dependency Map Data Package

Example data for the dyebias package, which implements the GASSCO method.

An ExperimentHub Package for data sets with an Epithelial to Mesenchymal Transition (EMT)

ExperimentHub package containing model data for predicting preeclampsia status for based on plcaental DNA methylation profile

The ewceData package provides reference data required for ewce

Illumina DASL example microarray data

RangedSummarizedExperiment for time course RNA-Seq of fission yeast in response to stress, by Leong et al., Nat Commun 2014.

RNA-seq data with different levels of gDNA contamination

Auxillary data for gage package

Experimental data for showing functionalities of the genomation package

Example data for the GPA package (Genetic analysis incorporating Pleiotropy and Annotation)

Synthetic Expression Data for Gene Regulatory Network Inference

Sample data - Hapmap 100K HIND Affymetrix

Sample data - Hapmap 100K XBA Affymetrix

Sample data - Hapmap 500K NSP Affymetrix

Sample data - Hapmap 500K STY Affymetrix

Sample data - Hapmap SNP 5.0 Affymetrix

Sample data - Hapmap SNP 6.0 Affymetrix

Dowloads A Gene Expression Dataset From GEO And Checks If It Contains Data Of Healthy Controls Or Not

CellScore Standard Cell Types Expression Dataset [hgu133plus2]

Example Data Package for CellScore

Access to SRT and snRNA-seq data from spatial_HPC project

Data for iModMix Package

DKFZ kidney package

leeBamViews -- multiple yeast RNAseq samples excerpted from Lee 2009

Leukemia's microarray gene expression data (expressionSet).

RGLists from the Glas and Buyse breast cancer studies

Meta cohort survival data

Data used in the miRcomp package

MetaboLights MTBLS2: Comparative LC/MS-based profiling of silver nitrate-treated Arabidopsis thaliana leaves of wild-type and cyp79B2 cyp79B3 double knockout plants. Böttcher et al. (2004)

Multi-sample multi-group spatially resolved transcriptomic data

Genes Sets for Functional Enrichment Analysis with the 'mulea' R Package

Data Package for multiWGCNA

Multi-sample multi-group scRNA-seq data

Mouse nanotube CAGE data

ExperimentHub datasets for the nullranges package

Open Cancer TherApeutic Discovery (OCTAD) database

Platform Design Info for Affymetrix Atdschip_tiling

Datasets and test data files for the plotgardener package

Various data sets for use with the puma package

A collection of datasets for use with raer package

rcellminerData: Molecular Profiles and Drug Response for the NCI-60 Cell Lines

Normalized gene expression dataset published by Wollbold et al. [2009] (WOLLBOLD).