Bioconductor Packages

4,656 packages in the Bioconductor catalogue.

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Showing 51–100 of 1,754 packages

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Package	Category	Version	Last Release	Status
BSgenome.Btaurus.UCSC.bosTau4.masked Bioc Full masked genome sequences for Bos taurus (UCSC version bosTau4)	annotation	1.3.99	3.23	current
BSgenome.Btaurus.UCSC.bosTau6 Bioc Full genome sequences for Bos taurus (UCSC version bosTau6)	annotation	1.4.0	3.23	current
BSgenome.Btaurus.UCSC.bosTau6.masked Bioc Full masked genome sequences for Bos taurus (UCSC version bosTau6)	annotation	1.3.99	3.23	current
BSgenome.Btaurus.UCSC.bosTau8 Bioc Full genome sequences for Bos taurus (UCSC version bosTau8)	annotation	1.4.2	3.23	current
BSgenome.Btaurus.UCSC.bosTau9 Bioc Full genome sequences for Bos taurus (UCSC version bosTau9)	annotation	1.4.2	3.23	current
BSgenome.Btaurus.UCSC.bosTau9.masked Bioc Full masked genome sequences for Bos taurus (UCSC version bosTau9)	annotation	1.4.4	3.23	current
BSgenome.Carietinum.NCBI.v1 Bioc Cicer arietinum (Chickpea) full genome (NCBI version ASM33114v1)	annotation	1.0.0	3.23	current
BSgenome.Celegans.UCSC.ce10 Bioc Full genome sequences for Caenorhabditis elegans (UCSC version ce10)	annotation	1.4.0	3.23	current
BSgenome.Celegans.UCSC.ce11 Bioc Full genome sequences for Caenorhabditis elegans (UCSC version ce11)	annotation	1.4.2	3.23	current
BSgenome.Celegans.UCSC.ce2 Bioc Full genome sequences for Caenorhabditis elegans (UCSC version ce2)	annotation	1.4.0	3.23	current
BSgenome.Celegans.UCSC.ce6 Bioc Full genome sequences for Caenorhabditis elegans (UCSC version ce6)	annotation	1.4.0	3.23	current
BSgenome.Cfamiliaris.UCSC.canFam2 Bioc Full genome sequences for Canis lupus familiaris (UCSC version canFam2)	annotation	1.4.0	3.23	current
BSgenome.Cfamiliaris.UCSC.canFam2.masked Bioc Full masked genome sequences for Canis lupus familiaris (UCSC version canFam2)	annotation	1.3.99	3.23	current
BSgenome.Cfamiliaris.UCSC.canFam3 Bioc Full genome sequences for Canis lupus familiaris (UCSC version canFam3)	annotation	1.4.0	3.23	current
BSgenome.Cfamiliaris.UCSC.canFam3.masked Bioc Full masked genome sequences for Canis lupus familiaris (UCSC version canFam3)	annotation	1.3.99	3.23	current
BSgenome.Cjacchus.UCSC.calJac3 Bioc Full genome sequences for Callithrix jacchus (UCSC version calJac3)	annotation	1.4.2	3.23	current
BSgenome.Cjacchus.UCSC.calJac4 Bioc Full genome sequences for Callithrix jacchus (UCSC version calJac4)	annotation	1.5.0	3.23	current
BSgenome.CneoformansVarGrubiiKN99.NCBI.ASM221672v1 Bioc Full Genome Sequence for Cryptococcus neoformans var. grubii KN99 (ASM221672v1)	annotation	1.0.0	3.23	current
BSgenome.Creinhardtii.JGI.v5.6 Bioc Full genome sequences for Chlamydomonas reinhardtii (v5.6)	annotation	1.5.0	3.23	current
BSgenome.Dmelanogaster.UCSC.dm2 Bioc Full genome sequences for Drosophila melanogaster (UCSC version dm2)	annotation	1.4.0	3.23	current
BSgenome.Dmelanogaster.UCSC.dm2.masked Bioc Full masked genome sequences for Drosophila melanogaster (UCSC version dm2)	annotation	1.3.99	3.23	current
BSgenome.Dmelanogaster.UCSC.dm3 Bioc Full genome sequences for Drosophila melanogaster (UCSC version dm3)	annotation	1.4.0	3.23	current
BSgenome.Dmelanogaster.UCSC.dm3.masked Bioc Full masked genome sequences for Drosophila melanogaster (UCSC version dm3)	annotation	1.3.99	3.23	current
BSgenome.Dmelanogaster.UCSC.dm6 Bioc Full genome sequences for Drosophila melanogaster (UCSC version dm6)	annotation	1.4.1	3.23	current
BSgenome.Drerio.UCSC.danRer10 Bioc Full genome sequences for Danio rerio (UCSC version danRer10)	annotation	1.4.2	3.23	current
BSgenome.Drerio.UCSC.danRer11 Bioc Full genome sequences for Danio rerio (UCSC version danRer11)	annotation	1.4.2	3.23	current
BSgenome.Drerio.UCSC.danRer5 Bioc Full genome sequences for Danio rerio (UCSC version danRer5)	annotation	1.4.0	3.23	current
BSgenome.Drerio.UCSC.danRer5.masked Bioc Full masked genome sequences for Danio rerio (UCSC version danRer5)	annotation	1.3.99	3.23	current
BSgenome.Drerio.UCSC.danRer6 Bioc Full genome sequences for Danio rerio (UCSC version danRer6)	annotation	1.4.0	3.23	current
BSgenome.Drerio.UCSC.danRer6.masked Bioc Full masked genome sequences for Danio rerio (UCSC version danRer6)	annotation	1.3.99	3.23	current
BSgenome.Drerio.UCSC.danRer7 Bioc Full genome sequences for Danio rerio (UCSC version danRer7)	annotation	1.4.0	3.23	current
BSgenome.Drerio.UCSC.danRer7.masked Bioc Full masked genome sequences for Danio rerio (UCSC version danRer7)	annotation	1.3.99	3.23	current
BSgenome.Dvirilis.Ensembl.dvircaf1 Bioc Full genome sequences for Drosophila virilis (assembly dvir_caf1)	annotation	1.4.3	3.23	current
BSgenome.Ecoli.NCBI.20080805 Bioc Escherichia coli full genomes	annotation	1.3.1000	3.23	current
BSgenome.Gaculeatus.UCSC.gasAcu1 Bioc Full genome sequences for Gasterosteus aculeatus (UCSC version gasAcu1)	annotation	1.4.0	3.23	current
BSgenome.Gaculeatus.UCSC.gasAcu1.masked Bioc Full masked genome sequences for Gasterosteus aculeatus (UCSC version gasAcu1)	annotation	1.3.99	3.23	current
BSgenome.Ggallus.UCSC.galGal3 Bioc Full genome sequences for Gallus gallus (UCSC version galGal3)	annotation	1.4.0	3.23	current
BSgenome.Ggallus.UCSC.galGal3.masked Bioc Full masked genome sequences for Gallus gallus (UCSC version galGal3)	annotation	1.3.99	3.23	current
BSgenome.Ggallus.UCSC.galGal4 Bioc Full genome sequences for Gallus gallus (UCSC version galGal4)	annotation	1.4.0	3.23	current
BSgenome.Ggallus.UCSC.galGal4.masked Bioc Full masked genome sequences for Gallus gallus (UCSC version galGal4)	annotation	1.3.99	3.23	current
BSgenome.Ggallus.UCSC.galGal5 Bioc Full genome sequences for Gallus gallus (UCSC version galGal5)	annotation	1.4.2	3.23	current
BSgenome.Ggallus.UCSC.galGal6 Bioc Full genome sequences for Gallus gallus (UCSC version galGal6)	annotation	1.4.2	3.23	current
BSgenome.Gmax.NCBI.Gmv40 Bioc Full genome sequences for Glycine max (Gmv40)	annotation	4.0	3.23	current
BSgenome.Hsapiens.1000genomes.hs37d5 Bioc 1000genomes Reference Genome Sequence (hs37d5)	annotation	0.99.1	3.23	current
BSgenome.Hsapiens.NCBI.GRCh38 Bioc Full genome sequences for Homo sapiens (GRCh38)	annotation	1.3.1000	3.23	current
BSgenome.Hsapiens.NCBI.T2T.CHM13v2.0 Bioc T2T-CHM13v2.0 assembly (Homo sapiens) wrapped in a BSgenome object	annotation	1.5.0	3.23	current
BSgenome.Hsapiens.UCSC.hg17 Bioc Full genome sequences for Homo sapiens (UCSC version hg17)	annotation	1.3.1001	3.23	current
BSgenome.Hsapiens.UCSC.hg17.masked Bioc Full masked genome sequences for Homo sapiens (UCSC version hg17)	annotation	1.3.999	3.23	current
BSgenome.Hsapiens.UCSC.hg18 Bioc Full genome sequences for Homo sapiens (UCSC version hg18)	annotation	1.3.1000	3.23	current
BSgenome.Hsapiens.UCSC.hg18.masked Bioc Full masked genome sequences for Homo sapiens (UCSC version hg18)	annotation	1.3.99	3.23	current