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Bioconductor Packages

4,656 packages in the Bioconductor catalogue.

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4,656

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3,810

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846

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5

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All (4,656) Software (2,418) Annotation (928) Experiment (436) Workflows (28)

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Showing 51–77 of 77 packages

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Package Status
iSEEfier Bioc

Streamlining the creation of initial states for starting an iSEE instance

current
iSEEhub Bioc

iSEE for the Bioconductor ExperimentHub

current

iSEE extension for panels related to pathway analysis

current
iSEEtree Bioc

Interactive visualisation for microbiome data

current
ideal Bioc

Interactive Differential Expression AnaLysis

current
igvShiny Bioc

igvShiny: a wrapper of Integrative Genomics Viewer (IGV - an interactive tool for visualization and exploration integrated genomic data)

current
imageTCGA Bioc

TCGA Diagnostic Image Database Explorer

current
meshr Bioc

Tools for conducting enrichment analysis of MeSH

current

Mapping of Metabolite IDs from Different Sources

current
miaDash Bioc

Dashboard for the interactive analysis and exploration of microbiome data

current

A data package containing annotation data for mouseCHRLOC

current
omXplore Bioc

Vizualization tools for 'omics' datasets with R

current

Interactive Visualization of RNA-seq Data Using a Principal Components Approach

current

Demonstration Data from rGenomeTracks Package

current
ratCHRLOC Bioc

A data package containing annotation data for ratCHRLOC

current
rawDiag Bioc

Brings Orbitrap Mass Spectrometry Data to Life; Fast and Colorful

current

A set of annotation maps for reactome

current

Pretrained models for scAnnotatR package

current
scafari Bioc

Analysis of scDNA-seq data

current
scanMiRApp Bioc

scanMiR shiny application

current

A Grammar-based Toolkit for Scalable and Interactive Genomics Data Visualization for R and Shiny

current
shinyDSP Bioc

A Shiny App For Visualizing Nanostring GeoMx DSP Data

current
squallms Bioc

Speedy quality assurance via lasso labeling for LC-MS data

current

AnnotationData for Synaptome.DB package

current

Synamptosome Proteome Database

current

systemPipeR: A Multipurpose Workflow Management System for Reproducible Data Analysis

current

systemPipeShiny: An Interactive Framework for Workflow Management and Visualization

current