metapone
Bioc currentConducts pathway test of metabolomics data using a weighted permutation test
v1.18.0
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software
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Artistic-2.0
Release Lineage
Entered 3.14 · Oct 27, 2021
Current · Requires R 4.6
1.0
In 10 of 49 releases
3.23
Description
The package conducts pathway testing from untargetted metabolomics data. It requires the user to supply feature-level test results, from case-control testing, regression, or other suitable feature-level tests for the study design. Weights are given to metabolic features based on how many metabolites they could potentially match to. The package can combine positive and negative mode results in pathway tests.
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Topics
People
- Tianwei Yu maintainer
- Leqi Tian author
- Tianwei Yu author