Skip to content

frenchFISH

Bioc current

Poisson Models for Quantifying DNA Copy-number from FISH Images of Tissue Sections

v1.24.0 · software · Artistic-2.0
View on Bioconductor ↗ Source ↗

Release Lineage

Entered 3.11 · Apr 28, 2020

Current · Requires R 4.6

1.0 In 13 of 49 releases 3.23

Description

FrenchFISH comprises a nuclear volume correction method coupled with two types of Poisson models: either a Poisson model for improved manual spot counting without the need for control probes; or a homogenous Poisson Point Process model for automated spot counting.

Code & tests

Open call graph →

Code intelligence has not been computed for this package yet.

Code

Code metrics have not been computed for this package yet.

Topics

Software
Software › ResearchField › BiomedicalInformatics
Software › ResearchField › CellBiology
Software › ResearchField › Genetics
Software › StatisticalMethod › HiddenMarkovModel
Software › WorkflowStep › Preprocessing

People

Adam Berman