cellbaseR
Bioc currentQuerying annotation data from the high performance Cellbase web
Release Lineage
Entered 3.5 · Apr 25, 2017
Current · Requires R 4.6
Description
This R package makes use of the exhaustive RESTful Web service API that has been implemented for the Cellabase database. It enable researchers to query and obtain a wealth of biological information from a single database saving a lot of time. Another benefit is that researchers can easily make queries about different biological topics and link all this information together as all information is integrated.
Test coverage
Line coverage
–
Expression
–
Tests / Examples
–
Functions
18 10 exported
Complexity
3.2 avg / 16 max
Call network
18 nodes / 7 edges
Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.
Call graph
Open call graph →Lowest coverage
Per-function coverage is not measured for this package yet.
Code
Structure
Lines of code
2,495
Files
180
Compiled share
0%
Has compiled src
No
Language breakdown
API
Exported functions
10
Internal functions
8
Recent export changes
Testing & CI
Has tests
No
Test-to-code ratio
0.00
testthat edition
–
CI present
Yes
CI type
["travis"]
PR gated
No
Docs
Roxygen coverage
100%
Health & Security signals
Informational signals; not verdicts.
on.exit coverage
–
Unsafe pattern score
0
Dep constraint coverage
0%
Secret pattern count
0
Bundled 3rd-party code
2 items
Portability & License
Min R version
3.4
System requirements
–
C++ standard
–
License
Apache License (== 2.0)
License flags
not SPDX, not OSI
History
Versions
19
First release
2017-10-14
Latest release
2026-04-28
Avg cadence
181 days
Cold removal rate
100%
Dep drift
0
LOC over versions
Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.
Documentation
- Examples that run
- 100%
- Documented parameters
- 100%
- Return-value docs
- 100%
- References docs
- 0%
Topics
People
Mohammed OE Abdallah