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bugsigdbr

Bioc current

R-side access to published microbial signatures from BugSigDB

v1.18.0 · software · GPL-3
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Release Lineage

Entered 3.14 · Oct 27, 2021

Current · Requires R 4.6

1.0 In 10 of 49 releases 3.23

Description

The bugsigdbr package implements convenient access to bugsigdb.org from within R/Bioconductor. The goal of the package is to facilitate import of BugSigDB data into R/Bioconductor, provide utilities for extracting microbe signatures, and enable export of the extracted signatures to plain text files in standard file formats such as GMT.

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Topics

Software › Infrastructure › DataImport
Software › BiologicalQuestion › GeneSetEnrichment
Software › ResearchField › Metagenomics
Software › Technology › Sequencing › Microbiome

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Bioconductor (1)

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