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beachmat.hdf5

Bioc current

beachmat bindings for HDF5-backed matrices

v1.10.0 · software · GPL-3
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Release Lineage

Entered 3.18 · Oct 25, 2023

Current · Requires R 4.6

1.0 In 6 of 49 releases 3.23

Description

Extends beachmat to support initialization of tatami matrices from HDF5-backed arrays. This allows C++ code in downstream packages to directly call the HDF5 C/C++ library to access array data, without the need for block processing via DelayedArray. Some utilities are also provided for direct creation of an in-memory tatami matrix from a HDF5 file.

Code

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Topics

Software › Infrastructure › DataRepresentation
Software › Infrastructure › DataImport
Software › Infrastructure

Depended on by (2)

Bioconductor (2)

beachmat sketchR

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