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SPIA

Bioc current

Signaling Pathway Impact Analysis (SPIA) using combined evidence of pathway over-representation and unusual signaling perturbations

v2.64.0 · software · file LICENSE
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Release Lineage

Entered 2.4 · Apr 21, 2009

Current · Requires R 4.6

1.0 In 35 of 49 releases 3.23

Description

This package implements the Signaling Pathway Impact Analysis (SPIA) which uses the information form a list of differentially expressed genes and their log fold changes together with signaling pathways topology, in order to identify the pathways most relevant to the condition under the study.

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Topics

Software › Technology › Microarray
Software › StatisticalMethod › GraphAndNetwork

Depended on by (3)

Bioconductor (3)

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People

Adi Laurentiu Tarca