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PathoStat

Bioc current

PathoStat Statistical Microbiome Analysis Package

v1.38.0 · software · GPL (>= 2)
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Release Lineage

Entered 3.4 · Oct 18, 2016

Current · Requires R 4.6

1.0 In 20 of 49 releases 3.23

Description

The purpose of this package is to perform Statistical Microbiome Analysis on metagenomics results from sequencing data samples. In particular, it supports analyses on the PathoScope generated report files. PathoStat provides various functionalities including Relative Abundance charts, Diversity estimates and plots, tests of Differential Abundance, Time Series visualization, and Core OTU analysis.

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Topics

Software › Technology › Sequencing › Microbiome
Software › ResearchField › Metagenomics
Software › StatisticalMethod › GraphAndNetwork
Software › Technology › Microarray
Software › StatisticalMethod › PatternLogic
Software › StatisticalMethod › PrincipalComponent
Software › Technology › Sequencing
Software
Software › WorkflowStep › Visualization
Software › Technology › Sequencing › RNASeq
Software › ResearchField › Immunology › ImmunoOncology

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Solaiappan Manimaran