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PAST

Bioc current

Pathway Association Study Tool (PAST)

v1.28.0 · software · GPL (>=3) + file LICENSE
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Release Lineage

Entered 3.9 · May 3, 2019

Current · Requires R 4.6

1.0 In 15 of 49 releases 3.23

Description

PAST takes GWAS output and assigns SNPs to genes, uses those genes to find pathways associated with the genes, and plots pathways based on significance. Implements methods for reading GWAS input data, finding genes associated with SNPs, calculating enrichment score and significance of pathways, and plotting pathways.

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Topics

Software › WorkflowStep › Pathways
Software › BiologicalQuestion › GeneSetEnrichment

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