LipidSigR

Description

"LipidSigR" is an R package developed based on LipidSig web-based tool (http://www.chenglab.cmu.edu.tw/lipidsig/). This package integrates a comprehensive analysis for streamlined data mining of lipidomic datasets. We provide 2 main analysis workflows, which is "Profiling" and "Differential expression". Each section provides unique aspects to analyze the lipidome profiling data based on different characteristics including lipid class, chain length, unsaturation, hydroxyl group, and fatty acid composition. "Profiling" provides an overview of comprehensive analyses to efficiently examine data quality, the clustering of samples, the correlation between lipid species, and the composition of lipid characteristics. "Differential expression" integrates many useful lipid-focused analyses for identifying significant lipid species or lipid characteristics.

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People

• Wei-Chung Cheng author maintainer cph
• Wen-Jen Lin author contributor
• Hsiu-Cheng Liu contributor
• Pei-Chun Shen contributor
• Meng-Hsin Tsai contributor