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DNAcopy

Bioc current

DNA Copy Number Data Analysis

v1.86.0 · software · GPL (>= 2)
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Release Lineage

Entered 1.4 · May 17, 2004

Current · Requires R 4.6

1.0 In 45 of 49 releases 3.23

Description

Implements the circular binary segmentation (CBS) algorithm to segment DNA copy number data and identify genomic regions with abnormal copy number.

Code

Code metrics have not been computed for this package yet.

Topics

Software › Technology › Microarray
Software › AssayDomain › CopyNumberVariation

Depended on by (45)

Bioconductor (36)

ADaCGH2 CGHcall cghMCR ChAMP cn.farms cn.mops CNAnorm CNVrd2 conumee CopyNumberPlots CRImage fastseg GWASTools maftools MDTS MEDIPS MinimumDistance nullranges PureCN QDNAseq rCGH SCOPE sesame wavFeatExt AneuFinder ArrayTV beadarraySNP ceRNAR Clonality contiBAIT +6 more

CRAN (9)

CSclone ParDNAcopy PSCBS jointseg ACNE aroma.cn aroma.core bcp calmate

People

Venkatraman E. Seshan