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CountClust

Bioc removed

Clustering and Visualizing RNA-Seq Expression Data using Grade of Membership Models

v1.24.0 · GPL (>= 2)
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Release Lineage

Entered 3.3 · May 4, 2016

Removed after 3.15 · Apr 27, 2022

1.0 In 13 of 49 releases 3.23

Description

Fits grade of membership models (GoM, also known as admixture models) to cluster RNA-seq gene expression count data, identifies characteristic genes driving cluster memberships, and provides a visual summary of the cluster memberships.

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Topics

Software › ResearchField › ImmunoOncology
Software › Technology › Sequencing › RNASeq
Software › AssayDomain › GeneExpression
Software › StatisticalMethod › Clustering
Software › Technology › Sequencing
Software › StatisticalMethod
Software
Software › WorkflowStep › Visualization

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