CRAN requires the check problems on this package to be fixed before 2026-08-31 or it will be archived.

zooimage

5.5.2

Analysis of Numerical Plankton Images

0packages depend

2.4Kdownloads / year

–test coverage

0/13checks pass

Overview

About

Maintained by Philippe GrosjeanFirst published 2013-02-113 releasesCRAN page ↗

A free (open source) solution for analyzing digital images of plankton. In combination with ImageJ, a free image analysis system, it processes digital images, measures individuals, trains for automatic classification of taxa, and finally, measures plankton samples (abundances, total and partial size spectra or biomasses, etc.).

Install

R (CRAN)Ubuntu (r2u)openSUSE (OBS)

install.packages("zooimage", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-zooimage

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-zooimage

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

13NOTE

Failing flavors

NOTE r-devel-linux-x86_64-debian-clang
NOTE r-devel-linux-x86_64-debian-gcc
NOTE r-devel-linux-x86_64-fedora-clang
NOTE r-devel-linux-x86_64-fedora-gcc
NOTE r-devel-windows-x86_64
NOTE r-oldrel-macos-arm64
NOTE r-oldrel-macos-x86_64
NOTE r-oldrel-windows-x86_64
NOTE r-patched-linux-x86_64
NOTE r-release-linux-x86_64
NOTE r-release-macos-arm64
NOTE r-release-macos-x86_64
NOTE r-release-windows-x86_64

Slowest check: 3.1 min · r-devel-linux-x86_64-fedora-clang

Code health

None

Tests · ratio 0.00

not tracked

Coverage

100%

Documentation · exports

Dependencies · direct

Check history

NOTE2026-03-10
0 OK · 14 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMENoVignettesNopkgdown siteNoNEWSNoCode of conductNoContributing guideNo

Examples that run: 94%
Documented parameters: 91%
Return-value docs: 75%
References docs: 6%

Downloads

2.4K

CRAN downloads in the past year

Rank #14,359 · ~7/day · ~199/mo

Releases R versions

Daily download trend is not available in this view yet.

22730 days

74790 days

2.4K1 year

Compare downloads with other packages →

Also on162 r2u41 autocran

Dependencies

Declared dependencies

13 external dependencies (excludes base and recommended)

Depends (2)

R >= 2.15.0mlearning

Imports (13)

svMisc svDialogs filehash jpeg png tiffutilsdigesttoolsMASSmda shiny DT

LinkingTo (0)

none

Suggests (2)

rJava mlbench

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

People & History

People (3)

Maintainer (1)

Philippe Grosjean

Author, Maintainer · added in 3.0-5

Authors (3)

Philippe Grosjean

Author, Maintainer · added in 3.0-5

Kevin Denis

Author · added in 3.0-5

Guillaume Wacquet

Author · added in 5.5.2

Listed in earlier versions (2)

K. Denis & R. Francois

no longer listed · 3.0-3

Ph. Grosjean

no longer listed · 3.0-3

Package Timeline

3 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
R
R 4.3.0 released · 2023-04-21
R
R 4.2.0 released · 2022-04-22
R
R 4.1.0 released · 2021-05-18
R
R 4.0.0 released · 2020-04-24
R
R 3.6.0 released · 2019-04-26
5.5.2Latest
2018-06-29 · current release · diff ↗
R
R 3.5.0 released · 2018-04-23
R
R 3.4.0 released · 2017-04-21
R
R 3.3.0 released · 2016-05-03
R
R 3.2.0 released · 2015-04-16
R
R 3.1.0 released · 2014-04-10
3.0-5
2014-03-02 · diff ↗
R
R 3.0.0 released · 2013-04-03

Show 2 earlier events

3.0-3
2013-02-11
R
R 2.15.0 released · 2012-03-30

Package metadata

First published: 2013-02-11
Total releases: 3 / 13 yrs
License: GPL (>= 2) OSI
Minimum R: ≥ 2.15.0
Download size: 2.8 MB
Installed size: not tracked yet
With dependencies: not tracked yet

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