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zfa

Zoom-Focus Algorithm

v1.1.0 · Jan 29, 2024 · GPL

Description

Performs Zoom-Focus Algorithm (ZFA) to optimize testing regions for rare variant association tests in exome sequencing data.

Downloads

CRAN

234

Last 30 days

21223rd

536

Last 90 days

1.7K

Last year

Trend: +60.3% (30d vs prior 30d)

r2u CRAN

24

Last 30 days

114

Last 90 days

383

Last year

Trend: -40% (30d vs prior 30d)

autoCRAN

2

Last 7 days

5

Last 30 days

0

All-time

autoCRAN-only: this name is served only by autoCRAN, so the count is exact.

CRAN Check Status

13 OK
Show all 13 flavors
Flavor Status
r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK

Check History

OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

Code

Structure

Lines of code

556

Files

17

Compiled share

8.3%

Has compiled src

Yes

Language breakdown

R 392 (70.5%)C/C++/src 46 (8.3%)Docs 118 (21.2%)

API

Exported functions

1

Internal functions

8

Recent export changes

v1.0+1 zfa

Testing & CI

Has tests

No

Test-to-code ratio

0.00

testthat edition

CI present

No

CI type

[]

PR gated

No

Docs

Return-value doc rate

100%

\dontrun example ratio

0%

Roxygen coverage

100%

Has pkgdown

No

NEWS present

No

Health & Security signals

Informational signals; not verdicts.

on.exit coverage

Unsafe pattern score

0

Dep constraint coverage

100%

Secret pattern count

0

Bundled 3rd-party code

2 items

Portability & License

Min R version

System requirements

C++ standard

License

GPL

License flags

not SPDX, not OSI

History

Versions

2

First release

2017-04-06

Latest release

2024-01-29

Avg cadence

2489 days

Cold removal rate

Dep drift

0

LOC over versions

v1.0: 547 LOCv1.1.0: 556 LOC

Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/cran-code-metrics.

Dependency Network

Dependencies Reverse dependencies SKAT zfa

Version History

3 tracked
new 1.1.0 Mar 10, 2026
updated 1.1.0 ← 1.0 diff Jan 28, 2024
new 1.0 Apr 5, 2017