vmeasur

0.1.4

Quantify the Contractile Nature of Vessels Monitored under an Operating Microscope

0packages depend

2.6Kdownloads / year

–test coverage

13/13checks pass

Overview

About

Maintained by James JW HucklesbyFirst published 2021-11-111 releasesCRAN page ↗

A variety of tools to allow the quantification of videos of the lymphatic vasculature taken under an operating microscope. Lymphatic vessels that have been injected with a variety of blue dyes can be tracked throughout the video to determine their width over time. Code is optimised for efficient processing of multiple large video files. Functions to calculate physiologically relevant parameters and generate graphs from these values are also included.

Install

R (CRAN)Ubuntu (r2u)

install.packages("vmeasur", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-vmeasur

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

Health

CRAN checks

13OK

Slowest check: 3.0 min · r-devel-linux-x86_64-fedora-clang

Code health

None

Tests · ratio 0.00

not tracked

Coverage

100%

Documentation · exports

Dependencies · direct

Check history

OK2026-06-09
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-06-08
12 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
OK2026-03-10
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMEYes · 496 wordsVignettesNopkgdown siteNoNEWSNoCode of conductNoContributing guideNo

Examples that run: 67%
Documented parameters: 100%
Return-value docs: 100%
References docs: 0%

Downloads

2.6K

CRAN downloads in the past year

Rank #13,735 · ~7/day · ~220/mo

Releases R versions

Daily download trend is not available in this view yet.

23530 days

77290 days

2.6K1 year

Compare downloads with other packages →

Also on104 r2u

Dependencies

Declared dependencies

20 external dependencies (excludes base and recommended)

Depends (1)

R >= 2.10

Imports (25)

ggplot2 readr stringr tidyr purrr ggpubr imager avtoolsdplyr rlang foreach magrittrgraphicsstatsutilspracma crayon svDialogs pdftools doFuture progressr future scalestcltk

LinkingTo (0)

none

Suggests (0)

none

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

Datasets

People & History

People (4)

Maintainer (1)

James JW Hucklesby

Author, Maintainer

Authors (4)

Author, Maintainer

Author

Author

Author

Package Timeline

1 release. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
0.1.4Latest
2026-03-10 · current release
R
R 4.5.0 released · 2025-04-11

Package metadata

First published: 2021-11-11
Total releases: 1 / 5 yrs
License: CC BY-NC-SA 4.0
Minimum R: ≥ 2.10
Bundled data: 162 KB / 1 file
Download size: 1.1 MB
Installed size: not tracked yet
With dependencies: not tracked yet

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