tmod
Feature Set Enrichment Analysis for Metabolomics and Transcriptomics
v0.50.13
·
Mar 31, 2023
·
GPL (>= 2.0)
Description
Methods and feature set definitions for feature or gene set enrichment analysis in transcriptional and metabolic profiling data. Package includes tests for enrichment based on ranked lists of features, functions for visualisation and multivariate functional analysis. See Zyla et al (2019) <doi:10.1093/bioinformatics/btz447>.
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14
NOTE
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| Flavor | Status |
|---|---|
| r-devel-linux-x86_64-debian-clang | NOTE |
| r-devel-linux-x86_64-debian-gcc | NOTE |
| r-devel-linux-x86_64-fedora-clang | NOTE |
| r-devel-linux-x86_64-fedora-gcc | NOTE |
| r-devel-macos-arm64 | NOTE |
| r-devel-windows-x86_64 | NOTE |
| r-oldrel-macos-arm64 | NOTE |
| r-oldrel-macos-x86_64 | NOTE |
| r-oldrel-windows-x86_64 | NOTE |
| r-patched-linux-x86_64 | NOTE |
| r-release-linux-x86_64 | NOTE |
| r-release-macos-arm64 | NOTE |
| r-release-macos-x86_64 | NOTE |
| r-release-windows-x86_64 | NOTE |
Check details (14 non-OK)
NOTE
r-devel-linux-x86_64-debian-clang
Rd files
checkRd: (-1) pvalEffectPlot.Rd:90: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:91: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:92: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:93: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:94: Lost braces in \itemize; meant \describe ?
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r-devel-linux-x86_64-debian-gcc
Rd files
checkRd: (-1) pvalEffectPlot.Rd:90: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:91: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:92: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:93: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:94: Lost braces in \itemize; meant \describe ?
NOTE
r-devel-linux-x86_64-fedora-clang
Rd files
checkRd: (-1) pvalEffectPlot.Rd:90: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:91: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:92: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:93: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:94: Lost braces in \itemize; meant \describe ?
NOTE
r-devel-linux-x86_64-fedora-gcc
Rd files
checkRd: (-1) pvalEffectPlot.Rd:90: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:91: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:92: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:93: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:94: Lost braces in \itemize; meant \describe ?
NOTE
r-devel-macos-arm64
Rd files
checkRd: (-1) pvalEffectPlot.Rd:90: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:91: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:92: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:93: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:94: Lost braces in \itemize; meant \describe ?
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r-devel-windows-x86_64
Rd files
checkRd: (-1) pvalEffectPlot.Rd:90: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:91: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:92: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:93: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:94: Lost braces in \itemize; meant \describe ?
NOTE
r-oldrel-macos-arm64
Rd files
checkRd: (-1) pvalEffectPlot.Rd:90: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:91: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:92: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:93: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:94: Lost braces in \itemize; meant \describe ?
NOTE
r-oldrel-macos-x86_64
Rd files
checkRd: (-1) pvalEffectPlot.Rd:90: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:91: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:92: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:93: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:94: Lost braces in \itemize; meant \describe ?
NOTE
r-oldrel-windows-x86_64
Rd files
checkRd: (-1) pvalEffectPlot.Rd:90: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:91: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:92: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:93: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:94: Lost braces in \itemize; meant \describe ?
NOTE
r-patched-linux-x86_64
Rd files
checkRd: (-1) pvalEffectPlot.Rd:90: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:91: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:92: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:93: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:94: Lost braces in \itemize; meant \describe ?
NOTE
r-release-linux-x86_64
Rd files
checkRd: (-1) pvalEffectPlot.Rd:90: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:91: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:92: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:93: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:94: Lost braces in \itemize; meant \describe ?
NOTE
r-release-macos-arm64
Rd files
checkRd: (-1) pvalEffectPlot.Rd:90: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:91: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:92: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:93: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:94: Lost braces in \itemize; meant \describe ?
NOTE
r-release-macos-x86_64
Rd files
checkRd: (-1) pvalEffectPlot.Rd:90: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:91: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:92: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:93: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:94: Lost braces in \itemize; meant \describe ?
NOTE
r-release-windows-x86_64
Rd files
checkRd: (-1) pvalEffectPlot.Rd:90: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:91: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:92: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:93: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:94: Lost braces in \itemize; meant \describe ?
Check History
NOTE 0 OK · 14 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 9, 2026
NOTE
r-devel-linux-x86_64-debian-clang
Rd files
checkRd: (-1) pvalEffectPlot.Rd:90: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:91: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:92: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:93: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:94: Lost braces in \itemize; meant \describe ?
NOTE
r-devel-linux-x86_64-debian-gcc
Rd files
checkRd: (-1) pvalEffectPlot.Rd:90: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:91: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:92: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:93: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:94: Lost braces in \itemize; meant \describe ?
NOTE
r-devel-linux-x86_64-fedora-clang
Rd files
checkRd: (-1) pvalEffectPlot.Rd:90: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:91: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:92: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:93: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:94: Lost braces in \itemize; meant \describe ?
NOTE
r-devel-linux-x86_64-fedora-gcc
Rd files
checkRd: (-1) pvalEffectPlot.Rd:90: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:91: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:92: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:93: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:94: Lost braces in \itemize; meant \describe ?
NOTE
r-devel-macos-arm64
Rd files
checkRd: (-1) pvalEffectPlot.Rd:90: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:91: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:92: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:93: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:94: Lost braces in \itemize; meant \describe ?
NOTE
r-devel-windows-x86_64
Rd files
checkRd: (-1) pvalEffectPlot.Rd:90: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:91: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:92: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:93: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:94: Lost braces in \itemize; meant \describe ?
NOTE
r-patched-linux-x86_64
Rd files
checkRd: (-1) pvalEffectPlot.Rd:90: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:91: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:92: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:93: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:94: Lost braces in \itemize; meant \describe ?
NOTE
r-release-linux-x86_64
Rd files
checkRd: (-1) pvalEffectPlot.Rd:90: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:91: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:92: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:93: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:94: Lost braces in \itemize; meant \describe ?
NOTE
r-release-macos-arm64
Rd files
checkRd: (-1) pvalEffectPlot.Rd:90: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:91: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:92: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:93: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:94: Lost braces in \itemize; meant \describe ?
NOTE
r-release-macos-x86_64
Rd files
checkRd: (-1) pvalEffectPlot.Rd:90: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:91: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:92: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:93: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:94: Lost braces in \itemize; meant \describe ?
NOTE
r-release-windows-x86_64
Rd files
checkRd: (-1) pvalEffectPlot.Rd:90: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:91: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:92: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:93: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:94: Lost braces in \itemize; meant \describe ?
NOTE
r-oldrel-macos-arm64
Rd files
checkRd: (-1) pvalEffectPlot.Rd:90: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:91: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:92: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:93: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:94: Lost braces in \itemize; meant \describe ?
NOTE
r-oldrel-macos-x86_64
Rd files
checkRd: (-1) pvalEffectPlot.Rd:90: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:91: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:92: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:93: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:94: Lost braces in \itemize; meant \describe ?
NOTE
r-oldrel-windows-x86_64
Rd files
checkRd: (-1) pvalEffectPlot.Rd:90: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:91: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:92: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:93: Lost braces in \itemize; meant \describe ? checkRd: (-1) pvalEffectPlot.Rd:94: Lost braces in \itemize; meant \describe ?
Dependency Network
Version History
new
0.50.13
Mar 9, 2026