tidyplate

2.2.0

Transform Microplate Data into Tibbles

0packages depend

2.7Kdownloads / year

99.8%test coverage

0/13checks pass

Overview

About

Maintained by Shubham DuttaFirst published 2024-01-116 releasesCRAN page ↗GitHub ↗

The goal of 'tidyplate' is to help researchers convert different types of microplates into tibbles which can be used in data analysis. It accepts xlsx and csv files formatted in a specific way as input. It supports all types of standard microplate formats such as 6-well, 12-well, 24-well, 48-well, 96-well, 384-well, and, 1536-well plates.

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("tidyplate", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("shubhamdutta26/tidyplate")

Development version from shubhamdutta26/tidyplate. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-tidyplate

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-tidyplate

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-tidyplate

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

13NOTE

Failing flavors

NOTE r-devel-linux-x86_64-debian-clang
NOTE r-devel-linux-x86_64-debian-gcc
NOTE r-devel-linux-x86_64-fedora-clang
NOTE r-devel-linux-x86_64-fedora-gcc
NOTE r-devel-windows-x86_64
NOTE r-oldrel-macos-arm64
NOTE r-oldrel-macos-x86_64
NOTE r-oldrel-windows-x86_64
NOTE r-patched-linux-x86_64
NOTE r-release-linux-x86_64
NOTE r-release-macos-arm64
NOTE r-release-macos-x86_64
NOTE r-release-windows-x86_64

Slowest check: 3.9 min · r-devel-linux-x86_64-fedora-clang

Code health

Yes

Tests · ratio 4.75

99.8%

Coverage · measured lines

100%

Documentation · exports

Dependencies · direct

Check history

NOTE2026-06-09
0 OK · 13 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-06-08
0 OK · 12 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
NOTE2026-03-10
3 OK · 11 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMEYes · 510 wordsVignettesYes · dynamicpkgdown siteNoNEWSYes · 100% structuredCode of conductNoContributing guideNo

Examples that run: 100%
Documented parameters: 100%
Return-value docs: 100%
References docs: 0%

Downloads

2.7K

CRAN downloads in the past year

Rank #19,177 · ~7/day · ~224/mo

Releases R versions

Daily download trend is not available in this view yet.

14930 days

57490 days

2.7K1 year

Compare downloads with other packages →

Also on121 r2u4 autocran

Repository

GitHub ↗ shubhamdutta26/tidyplate

1Stars

0Forks

0Open issues

0Open PRs

6Releases

189Commits

2Contributors

189 commits · Last activity 2024-12-07 · 0% stars, 30d

Stars over time

2024-05-02 · 12026-07-07 · 1

Repository practices

Upstream repositoryBeta

6 development-tooling and community-health practices detected across 5 families in the upstream repository

Checks run against github.com/shubhamdutta26/tidyplate on 2026-08-02.

Continuous integration (1)

GitHub Actions

CRAN release process (2)

cran-comments.mdrevdep/

Docs source (1)

README.Rmd

Research and citation (1)

codemeta.json

Show all practices

Lint, format, editor (1)

RStudio project

How this is detected·Detection ruleset v1 (2026-07-18)

Dependencies

Declared dependencies

10 external dependencies (excludes base and recommended)

Depends (0)

none

Imports (8)

data.table lifecycle openxlsx readxl rlang tibbletoolsutils

LinkingTo (0)

none

Suggests (4)

knitr rmarkdown spelling testthat

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

People & History

People (1)

Maintainer (1)

Shubham Dutta

Author, Maintainer, Copyright holder

Authors (1)

Shubham Dutta

Author, Maintainer, Copyright holder

Shubham Dutta

Author, Maintainer, Copyright holder

Package Timeline

6 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11
2.2.0Latest
2024-12-07 · current release · diff ↗
2.1.0
2024-11-19 · diff ↗
2.0.1
2024-10-09 · diff ↗
2.0.0
2024-10-04 · diff ↗
R
R 4.4.0 released · 2024-04-24
1.1.0
2024-02-04 · diff ↗
1.0.0
2024-01-11
R
R 4.3.0 released · 2023-04-21

Package metadata

First published: 2024-01-11
Total releases: 6 / 2 yrs
License: MIT + file LICENSE OSI
Download size: 2.3 MB
Installed size: not tracked yet
With dependencies: not tracked yet

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