tenm

0.5.1

Temporal Ecological Niche Models

0packages depend

2.2Kdownloads / year

94.0%test coverage

11/13checks pass

Overview

About

Maintained by Luis Osorio-OlveraFirst published 2024-07-231 releasesCRAN page ↗GitHub ↗

Implements methods and functions to calibrate time-specific niche models (multi-temporal calibration), letting users execute a strict calibration and selection process of niche models based on ellipsoids, as well as functions to project the potential distribution in the present and in global change scenarios.The 'tenm' package has functions to recover information that may be lost or overlooked while applying a data curation protocol. This curation involves preserving occurrences that may appear spatially redundant (occurring in the same pixel) but originate from different time periods. A novel aspect of this package is that it might reconstruct the fundamental niche more accurately than mono-calibrated approaches. The theoretical background of the package can be found in Peterson et al. (2011)doi:10.5860/CHOICE.49-6266.

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)

install.packages("tenm", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("luismurao/tenm")

Development version from luismurao/tenm. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-tenm

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-tenm

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

Health

CRAN checks

1ERROR1NOTE11OK

Failing flavors

NOTE r-devel-linux-x86_64-debian-gcc
ERROR r-release-macos-arm64

Slowest check: 6.1 min · r-oldrel-windows-x86_64

Code health

Yes

Tests · ratio 0.15

94.0%

Coverage · measured lines

100%

Documentation · exports

Dependencies · direct

Check history

ERROR2026-04-27
11 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
OK2026-04-25
12 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
NOTE2026-03-10
12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMEYes · 1,646 wordsVignettesYes · dynamicpkgdown siteNoNEWSYes · 100% structuredCode of conductNoContributing guideNo

Examples that run: 33%
Documented parameters: 100%
Return-value docs: 100%
References docs: 8%

Downloads

2.2K

CRAN downloads in the past year

Rank #19,106 · ~6/day · ~180/mo

Releases R versions

Daily download trend is not available in this view yet.

22130 days

58090 days

2.2K1 year

Compare downloads with other packages →

Also on97 r2u

Repository

GitHub ↗ luismurao/tenm

6Stars

2Forks

0Open issues

0Open PRs

0Releases

187Commits

2Contributors

187 commits · Last activity 2026-02-23

Stars over time

2025-03-20 · 62026-07-07 · 6

Repository practices

Upstream repositoryBeta

7 development-tooling and community-health practices detected across 6 families in the upstream repository

Checks run against github.com/luismurao/tenm on 2026-07-30.

Continuous integration (1)

GitHub Actions

CRAN release process (2)

cran-comments.mdCRAN-SUBMISSION

Docs source (1)

README.Rmd

Lint, format, editor (1)

RStudio project

Show all practices

Coverage (1)

Codecov

Git structural (1)

.gitattributes

How this is detected·Detection ruleset v1 (2026-07-18)

Dependencies

Declared dependencies

13 external dependencies (excludes base and recommended)

Depends (1)

R >= 4.1

Imports (12)

MASSterra sf purrr dplyr stringr rgl future tidyr furrr lubridatemethods

LinkingTo (0)

none

Suggests (3)

knitr rmarkdown testthat

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

Datasets

People & History

People (9)

Maintainer (1)

Luis Osorio-Olvera

Author, Maintainer

Authors (7)

Luis Osorio-Olvera

Author, Maintainer

Xavier Chiappa-Carrara

Author

Rusby G. Contreras-Díaz

Author

Miguel Hernández

Author

Oliver López-Corona

Author

Mariana Munguía-Carrara

Author

Fernanda Rosales-Ramos

Author

Contributors (2)

Townsend Peterson

Contributor

Jorge Soberón

Contributor

Package Timeline

1 release. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
0.5.1Latest
2026-03-10 · current release
R
R 4.5.0 released · 2025-04-11

Package metadata

First published: 2024-07-23
Total releases: 1 / 2 yrs
License: GPL-3 OSI
Minimum R: ≥ 4.1
Bundled data: 2.0 KB / 2 files
Download size: 941 KB
Installed size: not tracked yet
With dependencies: not tracked yet

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