swamp
Visualization, Analysis and Adjustment of High-Dimensional Data in Respect to Sample Annotations
Description
Collection of functions to connect the structure of the data with the information on the samples. Three types of associations are covered: 1. linear model of principal components. 2. hierarchical clustering analysis. 3. distribution of features-sample annotation associations. Additionally, the inter-relation between sample annotations can be analyzed. Simple methods are provided for the correction of batch effects and removal of principal components.
Downloads
289
Last 30 days
13813th
857
Last 90 days
3.3K
Last year
Trend: +51.3% (30d vs prior 30d)
9
Last 30 days
23
Last 90 days
96
Last year
Trend: -35.7% (30d vs prior 30d)
CRAN Check Status
Show all 13 flavors
| Flavor | Status |
|---|---|
| r-devel-linux-x86_64-debian-clang | NOTE |
| r-devel-linux-x86_64-debian-gcc | NOTE |
| r-devel-linux-x86_64-fedora-clang | OK |
| r-devel-linux-x86_64-fedora-gcc | OK |
| r-devel-windows-x86_64 | OK |
| r-oldrel-macos-arm64 | OK |
| r-oldrel-macos-x86_64 | OK |
| r-oldrel-windows-x86_64 | OK |
| r-patched-linux-x86_64 | OK |
| r-release-linux-x86_64 | OK |
| r-release-macos-arm64 | OK |
| r-release-macos-x86_64 | OK |
| r-release-windows-x86_64 | OK |
Check details (2 non-OK)
CRAN incoming feasibility
Maintainer: ‘Martin Lauss <martin.lauss@med.lu.se>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: person(given = "Martin",
family = "Lauss",
role = c("aut", "cre"),
email = "martin.lauss@med.lu.se")
as necessary.
CRAN incoming feasibility
Maintainer: ‘Martin Lauss <martin.lauss@med.lu.se>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: person(given = "Martin",
family = "Lauss",
role = c("aut", "cre"),
email = "martin.lauss@med.lu.se")
as necessary.
Check History
NOTE 12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026
CRAN incoming feasibility
Maintainer: ‘Martin Lauss <martin.lauss@med.lu.se>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: person(given = "Martin",
family = "Lauss",
role = c("aut", "cre"),
email = "martin.lauss@med.lu.se")
as necessary.
CRAN incoming feasibility
Maintainer: ‘Martin Lauss <martin.lauss@med.lu.se>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: person(given = "Martin",
family = "Lauss",
role = c("aut", "cre"),
email = "martin.lauss@med.lu.se")
as necessary.