surrosurv

1.1.27

Evaluation of Failure Time Surrogate Endpoints in Individual Patient Data Meta-Analyses

0packages depend

3.7Kdownloads / year

–test coverage

11/13checks pass

Overview

About

Maintained by Dan ChaltielFirst published 2016-11-108 releasesCRAN page ↗GitHub ↗

Provides functions for the evaluation of surrogate endpoints when both the surrogate and the true endpoint are failure time variables. The approaches implemented are: (1) the two-step approach (Burzykowski et al, 2001) <DOI:10.1111/1467-9876.00244> with a copula model (Clayton, Plackett, Hougaard) at the first step and either a linear regression of log-hazard ratios at the second step (either adjusted or not for measurement error); (2) mixed proportional hazard models estimated via mixed Poisson GLM (Rotolo et al, 2017 <DOI:10.1177/0962280217718582>).

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("surrosurv")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

pak::pak("Oncostat/surrosurv")

Development version from Oncostat/surrosurv. Requires the pak package.

Release

# one-time r2u setup for Ubuntu (noble)

curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash

# then install

sudo apt install r-cran-surrosurv

Fast Ubuntu binaries via r2u (no compilation). Run the setup once per machine.

bspm (used by r2u) also needs make: sudo apt install make

sudo dnf copr enable iucar/cran

sudo dnf install R-CRAN-surrosurv

RPMs from the iucar/cran COPR, rebuilt from CRAN.

sudo zypper install R-surrosurv

RPMs auto-built from CRAN on openSUSE OBS.

Health

CRAN checks

2NOTE11OK

Failing flavors

NOTE r-devel-linux-x86_64-debian-clang
NOTE r-devel-linux-x86_64-debian-gcc

Code health

None

Tests · ratio 0.00

not tracked

Coverage

100%

Documentation · exports

None

Vignettes

Yes

README

Dependencies · direct

Check history

NOTE2026-03-10
12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Downloads

3.7K

CRAN downloads in the past year

Rank #12,269 · ~10/day · ~308/mo

surrosurv Releases R versions

Daily download trend is not available in this view yet.

35830 days

86690 days

3.7K1 year

Compare downloads with other packages →

Also on113 r2u21 autocran66 c2d4u

Source & community

GitHub ↗

Repository stars, issues, and contributor activity are not tracked yet.

Dependencies

Declared dependencies

9 external dependencies (excludes base and recommended)

Depends (1)

R >= 3.5.0

Imports (13)

copula ehagrDeviceslme4MASSMatrixmsm mvmeta optimxparallelparfmstatssurvival

LinkingTo (0)

none

Suggests (2)

R.rsp testthat

Enhances (0)

none

Reverse dependencies

0direct

–indirect (not tracked)

Nothing depends on this yet.

Code & Tests

Code Composition

R 3,058 (58%)Other 1,154 (22%)Rd 1,078 (20%)

Test coverage

Line coverage

–

Expression

–

Tests / Examples

–

Functions

41 7 exported

Complexity

4.8 avg / 21 max

Call network

41 nodes / 36 edges

Test coverage has not been measured for this package yet; nodes fall back to a neutral fill.

Call graph

Open call graph →

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Lowest coverage

Per-function coverage is not measured for this package yet.

People & History

People (6)

Maintainer (1)

Dan Chaltiel

Maintainer

Authors (1)

Federico Rotolo

Author

Contributors (4)

Contributor

Contributor

Contributor

Contributor

Release timeline

8 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
1.1.27Latest
2025-10-10 · current release · diff ↗
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
R
R 4.3.0 released · 2023-04-21
1.1.26
2023-04-14 · diff ↗
R
R 4.2.0 released · 2022-04-22
R
R 4.1.0 released · 2021-05-18
R
R 4.0.0 released · 2020-04-24
R
R 3.6.0 released · 2019-04-26
1.1.25
2019-01-18 · diff ↗
R
R 3.5.0 released · 2018-04-23
1.1.24
2017-09-27 · diff ↗
1.1.15
2017-05-03 · diff ↗
R
R 3.4.0 released · 2017-04-21
1.1.10
2017-02-28 · diff ↗

Show 3 earlier events

1.1.5
2016-12-09 · diff ↗
1.0.0
2016-11-10
R
R 3.3.0 released · 2016-05-03

Package metadata

First published: 2016-11-10
Total releases: 8 / 10 yrs
License: GPL-2 OSI
Download size: not tracked yet
Installed size: not tracked yet
With dependencies: not tracked yet