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stIHC

Spatial Transcriptomics Iterative Hierarchical Clustering

v0.1.0 · Jan 12, 2026 · MIT + file LICENSE

Description

Spatial transcriptomics iterative hierarchical clustering ('stIHC'), is a method for identifying spatial gene co-expression modules, defined as groups of genes with shared spatial expression patterns. The method is applicable across spatial transcriptomics technologies with differing spatial resolution, and provides a framework for investigating the spatial organisation of gene expression in tissues. For further details, see Higgins C., Li J.J., Carey M. <doi:10.1002/qub2.70011>.

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OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 9, 2026

Dependency Network

Dependencies Reverse dependencies fdaPDE cluster mclust stIHC

Version History

new 0.1.0 Mar 9, 2026