spikeSlabGAM

1.1-20

Bayesian Variable Selection and Model Choice for Generalized Additive Mixed Models

2packages depend

9.3Kdownloads / year

–test coverage

13/13checks pass

Overview

About

Maintained by Fabian ScheiplFirst published 2011-04-2623 releasesCRAN page ↗GitHub ↗

Bayesian variable selection, model choice, and regularized estimation for (spatial) generalized additive mixed regression models via stochastic search variable selection with spike-and-slab priors.

Install

R (CRAN)pak (dev)Ubuntu (r2u)openSUSE (OBS)

install.packages("spikeSlabGAM", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("fabian-s/spikeSlabGAM")

Development version from fabian-s/spikeSlabGAM. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-spikeslabgam

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-spikeSlabGAM

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

13OK

Slowest check: 3.7 min · r-devel-linux-x86_64-fedora-clang

Code health

None

Tests · ratio 0.00

not tracked

Coverage

100%

Documentation · exports

Dependencies · direct

Check history

OK2026-03-10
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMENoVignettesYes · dynamicpkgdown siteNoNEWSYes · 33% structuredCode of conductNoContributing guideNo

Examples that run: 75%
Documented parameters: 97%
Return-value docs: 100%
References docs: 33%

Downloads

9.3K

CRAN downloads in the past year

Rank #4,385 · ~25/day · ~774/mo

Releases R versions

Daily download trend is not available in this view yet.

47430 days

2.1K90 days

9.3K1 year

Compare downloads with other packages →

Also on417 r2u21 autocran67 c2d4u

Repository

GitHub ↗ fabian-s/spikeslabgam

14Stars

3Forks

1Open issues

0Open PRs

0Releases

65Commits

3Contributors

65 commits · Last activity 2024-10-22

Stars over time

2024-10-08 · 142026-07-07 · 14

Repository practices

Upstream repositoryBeta

1 development-tooling and community-health practice detected across 1 family in the upstream repository

Checks run against github.com/fabian-s/spikeslabgam on 2026-07-19.

Continuous integration (1)

GitHub Actions

How this is detected·Detection ruleset v1 (2026-07-18)

Dependencies

Declared dependencies

14 external dependencies (excludes base and recommended)

Depends (1)

R >= 2.15.1

Imports (13)

codaclusterggplot2 gridExtra interpMASSMCMCpack mvtnorm R2WinBUGS reshape scalessplinesparallel

LinkingTo (0)

none

Suggests (5)

mboost mlbench gtable knitr rmarkdown

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

2direct

0indirect

SeBR countSTAR

Code & Tests

People & History

People (2)

Maintainer (1)

Fabian Scheipl

Author, Maintainer

Authors (1)

Fabian Scheipl

Author, Maintainer

Contributors (1)

Bettina Gruen

Contributor · added in 1.1-14

Package Timeline

23 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11
1.1-20Latest
2024-10-22 · current release · diff ↗
R
R 4.4.0 released · 2024-04-24
R
R 4.3.0 released · 2023-04-21
1.1-19
2022-06-10 · diff ↗
1.1-18
2022-05-30 · diff ↗
unarchivedReturned to CRAN
2022-05-30
archivedRemoved from CRAN
2022-05-07
installation issues were not corrected in time
R
R 4.2.0 released · 2022-04-22
R
R 4.1.0 released · 2021-05-18
R
R 4.0.0 released · 2020-04-24
1.1-15
2020-02-21 · diff ↗
R
R 3.6.0 released · 2019-04-26
1.1-14
2018-09-17 · diff ↗
R
R 3.5.0 released · 2018-04-23

Show 27 earlier events

R
R 3.4.0 released · 2017-04-21
R
R 3.3.0 released · 2016-05-03
1.1-11
2016-02-29 · diff ↗
1.1-9
2015-07-23 · diff ↗
R
R 3.2.0 released · 2015-04-16
1.1-8
2014-12-04 · diff ↗
R
R 3.1.0 released · 2014-04-10
3.0.3
2014-02-24 · diff ↗
1.1-7
2014-02-24 · diff ↗
1.1-6
2013-06-12 · diff ↗
3.0.2
2013-06-11 · diff ↗
R
R 3.0.0 released · 2013-04-03
3.0.0
2013-03-13 · diff ↗
1.1-5
2013-03-13 · diff ↗
1.1-3
2012-09-24 · diff ↗
2.15.2
2012-09-21 · diff ↗
1.1-2
2012-09-17 · diff ↗
R
R 2.15.0 released · 2012-03-30
1.1-0
2012-03-13 · diff ↗
2.15.0
2012-03-12 · diff ↗
R
R 2.14.0 released · 2011-10-31
2.13.2
2011-09-09 · diff ↗
1.0-0
2011-09-08 · diff ↗
0.9-6
2011-04-26 · diff ↗
R
R 2.13.0 released · 2011-04-13
2.12.1
2010-10-21
R
R 2.12.0 released · 2010-10-15

Package metadata

First published: 2011-04-26
Total releases: 23 / 15 yrs
License: MIT + file LICENSE OSI
Minimum R: ≥ 2.15.1
Download size: 707 KB
Installed size: not tracked yet
With dependencies: not tracked yet

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Bayesian Inference

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