R Observatory: Metrics for spaa version 0.2.5

Balamuta, James Joseph

spaa

0.2.5

SPecies Association Analysis

0packages depend

12.1Kdownloads / year

–test coverage

13/13checks pass

Overview

About

Maintained by Jinlong ZhangFirst published 2010-05-177 releasesCRAN page ↗GitHub ↗

Miscellaneous functions for analysing species association and niche overlap.

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("spaa", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("helixcn/spaa")

Development version from helixcn/spaa. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-spaa

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-spaa

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-spaa

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

13OK

Slowest check: 1.0 min · r-oldrel-windows-x86_64

Code health

None

Tests · ratio 0.00

not tracked

Coverage

0

Dependencies · direct

Check history

OK2026-08-04
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
NOTE2026-08-01
12 OK · 1 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
OK2026-03-10
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMEYes · 70 wordsVignettesNopkgdown siteNoNEWSNoCode of conductNoContributing guideNo

Examples that run: 100%
Documented parameters: not tracked
Return-value docs: not tracked
References docs: 77%

Downloads

12.1K

CRAN downloads in the past year

Rank #5,070 · ~33/day · ~1K/mo

Releases R versions

Daily download trend is not available in this view yet.

42130 days

1.6K90 days

12.1K1 year

Compare downloads with other packages →

Also on108 r2u2 autocran32 c2d4u

Repository

GitHub ↗ helixcn/spaa

13Stars

2Forks

0Open issues

0Open PRs

1Releases

30Commits

2Contributors

30 commits · Last activity 2022-04-22

Repository practices

Upstream repositoryBeta

1 development-tooling and community-health practice detected across 1 family in the upstream repository

Checks run against github.com/helixcn/spaa on 2026-08-03.

Lint, format, editor (1)

RStudio project

How this is detected·Detection ruleset v1 (2026-07-18)

Dependencies

Declared dependencies

1 external dependency (excludes base and recommended)

Depends (0)

none

Imports (0)

none

LinkingTo (0)

none

Suggests (1)

vegan

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

Datasets

People & History

People (1)

Maintainer (1)

Jinlong Zhang

Author, Maintainer · added in 0.2.0

Authors (1)

Jinlong Zhang

Author, Maintainer · added in 0.2.0

Listed in earlier versions (4)

Jinlong Zhang Qiong Ding <dingqiong@ibcas.ac.cn> Jihong Huang <xjhjh@ibcas.ac.cn>

no longer listed · 0.1.0 to 0.1.1

Jinlong Zhang Qiong Ding Jihong Huang

no longer listed · 0.1.2

Qiong Ding

no longer listed · 0.2.0

Jihong Huang

no longer listed · 0.2.0

Package Timeline

7 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11
0.2.5Latest
2025-01-08 · current release · diff ↗
R
R 4.4.0 released · 2024-04-24
R
R 4.3.0 released · 2023-04-21
R
R 4.2.0 released · 2022-04-22
R
R 4.1.0 released · 2021-05-18
R
R 4.0.0 released · 2020-04-24
R
R 3.6.0 released · 2019-04-26
R
R 3.5.0 released · 2018-04-23
R
R 3.4.0 released · 2017-04-21
0.2.2
2016-06-09 · diff ↗
R
R 3.3.0 released · 2016-05-03
R
R 3.2.0 released · 2015-04-16
R
R 3.1.0 released · 2014-04-10
0.2.1
2013-08-23 · diff ↗

Show 10 earlier events

R
R 3.0.0 released · 2013-04-03
0.2.0
2012-10-29 · diff ↗
R
R 2.15.0 released · 2012-03-30
R
R 2.14.0 released · 2011-10-31
R
R 2.13.0 released · 2011-04-13
R
R 2.12.0 released · 2010-10-15
0.1.2
2010-08-11 · diff ↗
0.1.1
2010-06-01 · diff ↗
0.1.0
2010-05-17
R
R 2.11.0 released · 2010-04-22

Package metadata

First published: 2010-05-17
Total releases: 7 / 16 yrs
License: GPL-2 OSI
Bundled data: 1.2 KB / 3 files
Download size: 16 KB
Installed size: not tracked yet
With dependencies: not tracked yet

Cite

Cite this package

Start here. This is the citation for the package itself.

citation("spaa")

CRAN DOI

https://doi.org/10.32614/CRAN.package.spaa

BibTeX, derived from DESCRIPTION

@Manual{spaa,
  title  = {spaa: SPecies Association Analysis},
  author = {Zhang, Jinlong},
  year   = {2025},
  note   = {R package version 0.2.5},
  doi    = {10.32614/CRAN.package.spaa},
  url    = {https://CRAN.R-project.org/package=spaa}
}

Derived from the package DESCRIPTION, not from a citation file the authors wrote. If they publish one later, prefer it.

This is the citation for the package. It is not a citation for the R Observatory.

Cite this page

Use this when the claim is about a measurement on this page.

BibTeX

@misc{robservatoryspaa,
  author    = {Balamuta, James Joseph},
  title     = {{R} {Observatory}: Metrics for {spaa} version 0.2.5},
  year      = {2026},
  publisher = {HJJB, LLC},
  url       = {https://r-observatory.thecoatlessprofessor.com/packages/spaa},
  note      = {Data set. Data release v2026-08-05}
}

APA

Balamuta, J. J. (2026). R Observatory: Metrics for spaa version 0.2.5 [Data set]. HJJB, LLC. Data release v2026-08-05. https://r-observatory.thecoatlessprofessor.com/packages/spaa

RIS

TY  - DATA
AU  - Balamuta, James Joseph
TI  - R Observatory: Metrics for spaa version 0.2.5
PY  - 2026
PB  - HJJB, LLC
N1  - Data release v2026-08-05
UR  - https://r-observatory.thecoatlessprofessor.com/packages/spaa
ER  -

In prose

These package metrics were obtained from the R Observatory (Balamuta, 2026), data release v2026-08-05, https://r-observatory.thecoatlessprofessor.com/packages/spaa.

Bound to data release v2026-08-05, which is what makes the numbers on this page reproducible. See how to cite.

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