R Observatory: Metrics for sevenbridges2 version 0.4.0

Balamuta, James Joseph

sevenbridges2

0.4.0

The 'Seven Bridges Platform' API Client

0packages depend

2.5Kdownloads / year

90.5%test coverage

13/13checks pass

Overview

About

Maintained by Marko TrifunovicFirst published 2024-02-034 releasesCRAN page ↗GitHub ↗

R client and utilities for 'Seven Bridges Platform' API, from 'Cancer Genomics Cloud' to other 'Seven Bridges' supported platforms. API documentation is hosted publicly at https://docs.sevenbridges.com/docs/the-api.

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("sevenbridges2", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("sbg/sevenbridges2")

Development version from sbg/sevenbridges2. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-sevenbridges2

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-sevenbridges2

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-sevenbridges2

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

13OK

Slowest check: 5.7 min · r-devel-linux-x86_64-fedora-clang

Code health

Yes

Tests · ratio 0.52

90.5%

Coverage · measured lines

100%

Documentation · exports

15

Dependencies · direct

Check history

OK2026-08-04
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
NOTE2026-08-01
12 OK · 1 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
OK2026-06-09
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-06-07
12 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
OK2026-04-25
12 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Show 1 earlier snapshots

NOTE2026-03-10
11 OK · 3 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMEYes · 585 wordsVignettesYes · dynamicpkgdown siteNoNEWSYes · 67% structuredCode of conductNoContributing guideNo

Examples that run: 100%
Documented parameters: 100%
Return-value docs: 10%
References docs: 3%

Downloads

2.5K

CRAN downloads in the past year

Rank #15,836 · ~7/day · ~205/mo

Releases R versions

Daily download trend is not available in this view yet.

16330 days

65390 days

2.5K1 year

Compare downloads with other packages →

Also on113 r2u

Repository

GitHub ↗ sbg/sevenbridges2

3Stars

0Forks

1Open issues

0Open PRs

4Releases

879Commits

7Contributors

api-clientbioinformaticscloudsevenbridges

879 commits · Last activity 2025-03-31

Stars over time

2025-03-26 · 32026-07-07 · 3

Repository practices

Upstream repositoryBeta

9 development-tooling and community-health practices detected across 6 families in the upstream repository

Checks run against github.com/sbg/sevenbridges2 on 2026-08-03.

Continuous integration (2)

GitHub ActionsGitLab CI

Reproducibility and dev environment (1)

renv

CRAN release process (2)

cran-comments.mdCRAN-SUBMISSION

Automation and maintenance (1)

pre-commit

Show all practices

Lint, format, editor (2)

lintrRStudio project

Coverage (1)

.covrignore

How this is detected·Detection ruleset v1 (2026-07-18)

Dependencies

Declared dependencies

21 external dependencies (excludes base and recommended)

Depends (1)

R >= 4.2.0

Imports (15)

httr R6 purrr jsonlite cli rlang curl glue stringrutilscheckmate DescTools yaml readr data.table

LinkingTo (0)

none

Suggests (7)

knitr rmarkdown testthat stringi withr remotes pkgdown

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

People & History

People (4)

Maintainer (1)

Marko Trifunovic

Author, Maintainer

Authors (3)

Marko Trifunovic

Author, Maintainer

Marija Gacic

Author

Vladimir Obucina

Author

Copyright holders (1)

Velsera

Copyright holder, Funder

Funders (1)

Velsera

Copyright holder, Funder

Package Timeline

4 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11
0.4.0Latest
2025-03-25 · current release · diff ↗
0.3.0
2025-02-25 · diff ↗
0.2.0
2024-07-02 · diff ↗
R
R 4.4.0 released · 2024-04-24
0.1.0
2024-02-03
R
R 4.3.0 released · 2023-04-21

Package metadata

First published: 2024-02-03
Total releases: 4 / 2 yrs
License: Apache License 2.0 OSI
Minimum R: ≥ 4.2.0
Download size: 2.5 MB
Installed size: not tracked yet
With dependencies: not tracked yet

Cite

Cite this package

Start here. This is the citation for the package itself.

citation("sevenbridges2")

CRAN DOI

https://doi.org/10.32614/CRAN.package.sevenbridges2

BibTeX, derived from DESCRIPTION

@Manual{sevenbridges2,
  title  = {sevenbridges2: The 'Seven Bridges Platform' API Client},
  author = {Trifunovic, Marko and Velsera and Gacic, Marija and Obucina, Vladimir},
  year   = {2025},
  note   = {R package version 0.4.0},
  doi    = {10.32614/CRAN.package.sevenbridges2},
  url    = {https://CRAN.R-project.org/package=sevenbridges2}
}

Derived from the package DESCRIPTION, not from a citation file the authors wrote. If they publish one later, prefer it.

This is the citation for the package. It is not a citation for the R Observatory.

Cite this page

Use this when the claim is about a measurement on this page.

BibTeX

@misc{robservatorysevenbridges2,
  author    = {Balamuta, James Joseph},
  title     = {{R} {Observatory}: Metrics for {sevenbridges2} version 0.4.0},
  year      = {2026},
  publisher = {HJJB, LLC},
  url       = {https://r-observatory.thecoatlessprofessor.com/packages/sevenbridges2},
  note      = {Data set. Data release v2026-08-05}
}

APA

Balamuta, J. J. (2026). R Observatory: Metrics for sevenbridges2 version 0.4.0 [Data set]. HJJB, LLC. Data release v2026-08-05. https://r-observatory.thecoatlessprofessor.com/packages/sevenbridges2

RIS

TY  - DATA
AU  - Balamuta, James Joseph
TI  - R Observatory: Metrics for sevenbridges2 version 0.4.0
PY  - 2026
PB  - HJJB, LLC
N1  - Data release v2026-08-05
UR  - https://r-observatory.thecoatlessprofessor.com/packages/sevenbridges2
ER  -

In prose

These package metrics were obtained from the R Observatory (Balamuta, 2026), data release v2026-08-05, https://r-observatory.thecoatlessprofessor.com/packages/sevenbridges2.

Bound to data release v2026-08-05, which is what makes the numbers on this page reproducible. See how to cite.

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