Description
Use this package to identify indicators of transparency within the published literature. It can identify and extract text related to indicators of transparency from specifically formatted TXT files and from PMC XML files (i.e. XML files downloaded from the PubMed Central). It builds on the original 'rtransparent' tool of Serghiou et al. (2021) <doi:10.1371/journal.pbio.3001107>.
Downloads
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24236th
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Last 90 days
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CRAN Check Status
Show all 11 flavors
| Flavor | Status |
|---|---|
| r-devel-linux-x86_64-debian-clang | OK |
| r-devel-linux-x86_64-debian-gcc | OK |
| r-devel-linux-x86_64-fedora-clang | OK |
| r-devel-linux-x86_64-fedora-gcc | OK |
| r-devel-windows-x86_64 | OK |
| r-oldrel-macos-arm64 | OK |
| r-oldrel-macos-x86_64 | OK |
| r-oldrel-windows-x86_64 | OK |
| r-release-macos-arm64 | OK |
| r-release-macos-x86_64 | OK |
| r-release-windows-x86_64 | OK |
Check History
OK 9 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Jul 3, 2026
Code
Structure
Lines of code
36,374
Files
123
Compiled share
0%
Has compiled src
No
Language breakdown
API
Exported functions
23
Internal functions
272
Recent export changes
Testing & CI
Has tests
Yes
Test-to-code ratio
1.34
testthat edition
–
CI present
No
CI type
[]
PR gated
No
Docs
Return-value doc rate
100%
\dontrun example ratio
87%
Roxygen coverage
100%
Has pkgdown
No
NEWS present
Yes
Health & Security signals
Informational signals; not verdicts.
on.exit coverage
0%
Unsafe pattern score
0
Dep constraint coverage
0%
Secret pattern count
0
Bundled 3rd-party code
2 items
Portability & License
Min R version
3.5.0
System requirements
–
C++ standard
–
License
GPL-3
License flags
SPDX valid, OSI approved
History
Versions
1
First release
2026-07-01
Latest release
2026-07-01
Avg cadence
–
Cold removal rate
–
Dep drift
0
Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/cran-code-metrics.