R Observatory: Metrics for rmdd version 0.0.0.1

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

rmdd

0.0.0.1

Resolve Mammal Names with the Mammal Diversity Database

0packages depend

2.1Kdownloads / year

77.5%test coverage

13/13checks pass

Overview

About

Maintained by Paul E. Santos AndradeFirst published 2026-03-231 releasesCRAN page ↗GitHub ↗

Download, inspect, reconcile, and summarize mammal taxonomic names with the Mammal Diversity Database (MDD). Supports accepted names, synonyms, original combinations, distribution summaries, and mapped outputs derived from packaged MDD releases. Designed for reproducible mammal name resolution workflows in 'R'.

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("rmdd", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("PaulESantos/rmdd")

Development version from PaulESantos/rmdd. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-rmdd

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-rmdd

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-rmdd

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

13OK

Slowest check: 5.0 min · r-release-macos-x86_64

Code health

Yes

Tests · ratio 0.17

77.5%

Coverage · measured lines

100%

Documentation · exports

14

Dependencies · direct

Check history

OK2026-08-05
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
NOTE2026-08-01
12 OK · 1 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
OK2026-04-25
12 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
NOTE2026-03-24
4 OK · 1 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMEYes · 640 wordsVignettesYes · dynamicpkgdown siteNoNEWSYes · 67% structuredCode of conductNoContributing guideNo

Examples that run: 100%
Documented parameters: 100%
Return-value docs: 100%
References docs: 0%

Downloads

2.1K

CRAN downloads in the past year

Rank #7,969 · ~6/day · ~174/mo

Releases R versions

Daily download trend is not available in this view yet.

22130 days

1.2K90 days

2.1K1 year

Compare downloads with other packages →

Also on74 r2u

Repository

GitHub ↗ paulesantos/rmdd

0Stars

0Forks

0Open issues

0Open PRs

0Releases

diversitymammals

Last activity 2026-05-17

Repository practices

Upstream repositoryBeta

6 development-tooling and community-health practices detected across 6 families in the upstream repository

Checks run against github.com/paulesantos/rmdd on 2026-08-03.

Continuous integration (1)

GitHub Actions

Reproducibility and dev environment (1)

data-raw/

CRAN release process (1)

cran-comments.md

Docs source (1)

README.Rmd

Show all practices

Lint, format, editor (1)

RStudio project

Coverage (1)

Codecov

How this is detected·Detection ruleset v1 (2026-07-18)

Dependencies

Declared dependencies

20 external dependencies (excludes base and recommended)

Depends (1)

R >= 4.3.0

Imports (14)

cli dplyr fs ggplot2 fuzzyjoin lifecycle readr rnaturalearth sf rlang stringr tibbletoolsutils

LinkingTo (0)

none

Suggests (8)

covr knitr lintr pkgdown rmarkdown rnaturalearthdata roxygen2 testthat

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

People & History

People (1)

Maintainer (1)

Paul E. Santos Andrade

Author, Maintainer, Copyright holder

Authors (1)

Paul E. Santos Andrade

Author, Maintainer, Copyright holder

Copyright holders (1)

Paul E. Santos Andrade

Author, Maintainer, Copyright holder

Package Timeline

1 release. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
0.0.0.1Latest
2026-03-23 · current release
R
R 4.5.0 released · 2025-04-11

Package metadata

First published: 2026-03-23
Total releases: 1 / 1 yrs
License: MIT + file LICENSE OSI
Minimum R: ≥ 4.3.0
Bundled data: 6.8 MB / 3 files
Download size: not tracked yet
Installed size: not tracked yet
With dependencies: not tracked yet

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("rmdd")

Format

Santos Andrade, P. E. (2026). rmdd: Resolve Mammal Names with the Mammal Diversity Database (Version 0.0.0.1) [Computer software]. https://doi.org/10.32614/CRAN.package.rmdd

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for rmdd version 0.0.0.1 [Data set]. HJJB, LLC. Data release v2026-08-07. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-07, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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