raptr

1.0.1

Representative and Adequate Prioritization Toolkit in R

0packages depend

9.6Kdownloads / year

78.1%test coverage

9/13checks pass

Overview

About

Maintained by Jeffrey O HansonFirst published 2016-10-2813 releasesCRAN page ↗GitHub ↗

Biodiversity is in crisis. The overarching aim of conservation is to preserve biodiversity patterns and processes. To this end, protected areas are established to buffer species and preserve biodiversity processes. But resources are limited and so protected areas must be cost-effective. This package contains tools to generate plans for protected areas (prioritizations), using spatially explicit targets for biodiversity patterns and processes. To obtain solutions in a feasible amount of time, this package uses the commercial 'Gurobi' software (obtained from https://www.gurobi.com/). For more information on using this package, see Hanson et al. (2018) doi:10.1111/2041-210X.12862.

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("raptr", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("jeffreyhanson/raptr")

Development version from jeffreyhanson/raptr. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-raptr

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-raptr

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-raptr

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

4NOTE9OK

Failing flavors

NOTE r-devel-linux-x86_64-debian-clang
NOTE r-devel-linux-x86_64-debian-gcc
NOTE r-devel-linux-x86_64-fedora-gcc
NOTE r-devel-windows-x86_64

Slowest check: 13.1 min · r-devel-linux-x86_64-fedora-clang

Code health

Yes

Tests · ratio 0.32

78.1%

Coverage · measured lines

100%

Documentation · exports

Dependencies · direct

Check history

NOTE2026-07-11
12 OK · 1 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
OK2026-06-21
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-06-20
12 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
OK2026-06-09
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-06-08
12 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE

Show 7 earlier snapshots

OK2026-05-02
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-04-25
11 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
NOTE2026-04-22
11 OK · 3 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-04-18
10 OK · 3 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
NOTE2026-04-10
11 OK · 3 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-04-09
10 OK · 3 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
NOTE2026-03-10
11 OK · 3 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMEYes · 364 wordsVignettesYes · dynamicpkgdown siteNoNEWSYes · 100% structuredCode of conductNoContributing guideNo

Examples that run: 0%
Documented parameters: 97%
Return-value docs: 88%
References docs: 1%

Downloads

9.6K

CRAN downloads in the past year

Rank #4,187 · ~26/day · ~803/mo

Releases R versions

Daily download trend is not available in this view yet.

48130 days

2.2K90 days

9.6K1 year

Compare downloads with other packages →

Also on436 r2u35 autocran

Repository

GitHub ↗ jeffreyhanson/raptr

8Stars

0Forks

0Open issues

0Open PRs

4Releases

450Commits

3Contributors

450 commits · Last activity 2024-02-14

Stars over time

2024-11-20 · 82026-07-07 · 8

Repository practices

Upstream repositoryBeta

4 development-tooling and community-health practices detected across 4 families in the upstream repository

Checks run against github.com/jeffreyhanson/raptr on 2026-07-19.

Continuous integration (1)

GitHub Actions

Reproducibility and dev environment (1)

Makefile

CRAN release process (1)

cran-comments.md

Docs source (1)

README.Rmd

How this is detected·Detection ruleset v1 (2026-07-18)

Dependencies

Declared dependencies

27 external dependencies (excludes base and recommended)

Depends (3)

R >= 4.0.0sf terra

Imports (19)

utilsmethodsstatsgraphicsgrDevicesspMatrixassertthatbootPBSmapping scales shape adehabitatHR RColorBrewer ggplot2 (>= 3.4.0)hypervolume ks mvtnorm (>= 1.1.3)withr

LinkingTo (3)

Rcpp RcppEigen BH

Suggests (10)

knitr roxygen2 rmarkdown testthat RgoogleMaps (>= 1.4.5.3)dplyr vegan gurobi (>= 8.0.0)gridExtra rgl

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

Code Composition

R 9,321 (57%)Rd 3,599 (22%)C++ 2,418 (15%)Vignettes 818 (5%)C 151 (1%)

Code characteristics

Object systems

S369S4 class15S4 generic3S4 method26

Cyclomatic complexity: 1.0 median / 36 max
Test cases: 115 / 0.32 per code line

Test coverage

Line coverage

78%

Expression

77.8%

Tests / Examples

78.1% / 1% ex

Functions

205 43 exported

Complexity

2.4 avg / 36 max

Call network

205 nodes / 116 edges

Call graph

Open call graph →

Loading call graph…

Lowest coverage

205 functions

Function	Cyclo	Coverage
SpatialPolygons2PolySet exp	1	0%
.onUnload	1	0%
affineTrans	1	0%
basemap	1	0%
basemap.RapData	4	0%
basemap.RapSolved	1	0%

People & History

People (4)

Maintainer (1)

Jeffrey O Hanson

Author, Maintainer

Authors (4)

Author, Maintainer

Author

Author

Author

Listed in earlier versions (5)

Richard A

no longer listed · 0.0.1 to 1.0.1

Jeffrey O

no longer listed · 0.0.1 to 1.0.1

Hugh P

no longer listed · 0.0.1 to 1.0.1

Jonathon R

no longer listed · 0.0.1

Jonathan R

no longer listed · 0.0.3 to 1.0.1

Package Timeline

13 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
1.0.1Latest
2024-01-28 · current release · diff ↗
R
R 4.3.0 released · 2023-04-21
1.0.0
2023-03-14 · diff ↗
0.2.1
2022-07-25 · diff ↗
unarchivedReturned to CRAN
2022-07-25
archivedRemoved from CRAN
2022-05-04
requires archived package 'RandomFields'
R
R 4.2.0 released · 2022-04-22
R
R 4.1.0 released · 2021-05-18
0.1.7
2020-07-31 · diff ↗
R
R 4.0.0 released · 2020-04-24
0.1.6
2020-03-11 · diff ↗
0.1.5
2020-02-12 · diff ↗
R
R 3.6.0 released · 2019-04-26

Show 10 earlier events

0.1.4
2019-04-11 · diff ↗
0.1.3
2018-11-26 · diff ↗
0.1.2
2018-06-28 · diff ↗
R
R 3.5.0 released · 2018-04-23
0.1.1
2017-11-20 · diff ↗
0.0.5
2017-08-10 · diff ↗
R
R 3.4.0 released · 2017-04-21
0.0.3
2016-11-25 · diff ↗
0.0.1
2016-10-28
R
R 3.3.0 released · 2016-05-03

Package metadata

First published: 2016-10-28
Total releases: 13 / 10 yrs
License: GPL-3 OSI
Minimum R: ≥ 4.0.0
Bundled data: 11 KB / 2 files
Download size: 4.4 MB
Installed size: not tracked yet
With dependencies: not tracked yet

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