ppmSuite

0.3.4

A Collection of Models that Employ Product Partition Distributions as a Prior on Partitions

0packages depend

3.7Kdownloads / year

–test coverage

0/13checks pass

Overview

About

Maintained by Garritt L. PageFirst published 2020-11-2314 releasesCRAN page ↗

Provides a suite of functions that fit models that use PPM type priors for partitions. Models include hierarchical Gaussian and probit ordinal models with a (covariate dependent) PPM. If a covariate dependent product partition model is selected, then all the options detailed in Page, G.L.; Quintana, F.A. (2018) doi:10.1007/s11222-017-9777-z are available. If covariate values are missing, then the approach detailed in Page, G.L.; Quintana, F.A.; Mueller, P (2020) doi:10.1080/10618600.2021.1999824 is employed. Also included in the package is a function that fits a Gaussian likelihood spatial product partition model that is detailed in Page, G.L.; Quintana, F.A. (2016) doi:10.1214/15-BA971, and multivariate PPM change point models that are detailed in Quinlan, J.J.; Page, G.L.; Castro, L.M. (2023) doi:10.1214/22-BA1344. In addition, a function that fits a univariate or bivariate functional data model that employs a PPM or a PPMx to cluster curves based on B-spline coefficients is provided.

Install

R (CRAN)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("ppmSuite", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-ppmsuite

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-ppmSuite

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-ppmSuite

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

13NOTE

Failing flavors

NOTE r-devel-linux-x86_64-debian-clang
NOTE r-devel-linux-x86_64-debian-gcc
NOTE r-devel-linux-x86_64-fedora-clang
NOTE r-devel-linux-x86_64-fedora-gcc
NOTE r-devel-windows-x86_64
NOTE r-oldrel-macos-arm64
NOTE r-oldrel-macos-x86_64
NOTE r-oldrel-windows-x86_64
NOTE r-patched-linux-x86_64
NOTE r-release-linux-x86_64
NOTE r-release-macos-arm64
NOTE r-release-macos-x86_64
NOTE r-release-windows-x86_64

Slowest check: 2.4 min · r-oldrel-windows-x86_64

Code health

None

Tests · ratio 0.00

not tracked

Coverage

100%

Documentation · exports

Dependencies · direct

Check history

NOTE2026-05-08
0 OK · 13 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
WARNING2026-05-07
0 OK · 12 NOTE · 1 WARNING · 0 ERROR · 0 FAILURE
NOTE2026-03-10
0 OK · 14 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMENoVignettesNopkgdown siteNoNEWSNoCode of conductNoContributing guideNo

Examples that run: 14%
Documented parameters: 100%
Return-value docs: 100%
References docs: 0%

Downloads

3.7K

CRAN downloads in the past year

Rank #10,694 · ~10/day · ~307/mo

Releases R versions

Daily download trend is not available in this view yet.

33830 days

1K90 days

3.7K1 year

Compare downloads with other packages →

Also on404 r2u29 autocran49 c2d4u

Dependencies

Declared dependencies

0 external dependencies (excludes base and recommended)

Depends (1)

R >= 3.5.0

Imports (1)

Matrix

LinkingTo (0)

none

Suggests (1)

cluster

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

Datasets

People & History

People (4)

Maintainer (1)

Garritt L. Page

Author, Maintainer, Copyright holder

Authors (2)

Garritt L. Page

Author, Maintainer, Copyright holder

Jose J. Quinlan

Author, Copyright holder · added in 0.2.1

Contributors (2)

S. McKay Curtis

Contributor, Copyright holder

Radford M. Neal

Contributor, Copyright holder

Garritt L. Page

Author, Maintainer, Copyright holder

Jose J. Quinlan

Author, Copyright holder · added in 0.2.1

S. McKay Curtis

Contributor, Copyright holder

Radford M. Neal

Contributor, Copyright holder

Listed in earlier versions (1)

Matthew J. Heiner

no longer listed · 0.3.1

Package Timeline

14 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
0.3.4Latest
2023-07-16 · current release · diff ↗
0.3.3
2023-07-11 · diff ↗
unarchivedReturned to CRAN
2023-07-11
archivedRemoved from CRAN
2023-07-03
issues were not corrected in time
R
R 4.3.0 released · 2023-04-21
0.3.2
2023-04-09 · diff ↗
0.3.1
2023-04-03 · diff ↗
0.2.4
2022-06-15 · diff ↗
0.2.3
2022-06-13 · diff ↗
0.2.2
2022-06-01 · diff ↗
R
R 4.2.0 released · 2022-04-22
0.2.1
2022-01-21 · diff ↗
0.1.8
2021-09-14 · diff ↗

Show 7 earlier events

0.1.7
2021-06-29 · diff ↗
0.1.6
2021-05-30 · diff ↗
R
R 4.1.0 released · 2021-05-18
0.1.3
2021-01-04 · diff ↗
0.1.1
2020-11-27 · diff ↗
0.1.0
2020-11-23
R
R 4.0.0 released · 2020-04-24

Package metadata

First published: 2020-11-23
Total releases: 14 / 6 yrs
License: GPL
Minimum R: ≥ 3.5.0
Bundled data: 67 KB / 7 files
Download size: 193 KB
Installed size: not tracked yet
With dependencies: not tracked yet

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