penaltyLearning

2024.9.3

Penalty Learning

5packages depend

12.4Kdownloads / year

80.2%test coverage

13/13checks pass

Overview

About

Maintained by Toby Dylan HockingFirst published 2017-06-0810 releasesCRAN page ↗GitHub ↗

Implementations of algorithms from Learning Sparse Penalties for Change-point Detection using Max Margin Interval Regression, by Hocking, Rigaill, Vert, Bach http://proceedings.mlr.press/v28/hocking13.html published in proceedings of ICML2013.

Install

R (CRAN)pak (dev)Ubuntu (r2u)openSUSE (OBS)

install.packages("penaltyLearning", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("tdhock/penaltyLearning")

Development version from tdhock/penaltyLearning. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-penaltylearning

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-penaltyLearning

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

13OK

Slowest check: 2.9 min · r-oldrel-windows-x86_64

Check history

OK2026-03-10
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

Documentation signals are not tracked yet for this package.

Downloads

12.4K

CRAN downloads in the past year

Rank #4,304 · ~34/day · ~1K/mo

penaltyLearning Releases R versions

Daily download trend is not available in this view yet.

45730 days

2.1K90 days

12.4K1 year

Compare downloads with other packages →

Also on813 r2u23 autocran17 c2d4u

Repository

GitHub ↗ tdhock/penaltylearning

16Stars

7Forks

1Open issues

0Open PRs

0Releases

294Commits

4Contributors

294 commits · Last activity 2024-10-02

Repository practices

Upstream repositoryBeta

1 development-tooling and community-health practice detected across 1 family in the upstream repository

Checks run against github.com/tdhock/penaltylearning on 2026-07-19.

Continuous integration (1)

GitHub Actions

How this is detected·Detection ruleset v1 (2026-07-18)

Dependencies

Declared dependencies

8 external dependencies (excludes base and recommended)

Depends (1)

R >= 2.10

Imports (2)

data.table ggplot2

LinkingTo (0)

none

Suggests (6)

neuroblastoma jointseg testthat future future.apply directlabels

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

5direct

0indirect

PeakSegJoint PeakSegOptimal PeakSegDP aum binsegRcpp

Code & Tests

People & History

People (1)

Maintainer (1)

Toby Dylan Hocking

Author, Maintainer

Authors (1)

Toby Dylan Hocking

Author, Maintainer

Listed in earlier versions (1)

Hocking

no longer listed · 2024.9.3

Package Timeline

10 releases. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11
2024.9.3Latest
2024-10-02 · current release · diff ↗
R
R 4.4.0 released · 2024-04-24
2024.1.25
2024-02-01 · diff ↗
2023.8.31
2023-09-06 · diff ↗
R
R 4.3.0 released · 2023-04-21
R
R 4.2.0 released · 2022-04-22
R
R 4.1.0 released · 2021-05-18
2020.5.13
2020-05-14 · diff ↗
R
R 4.0.0 released · 2020-04-24
2019.5.29
2019-06-09 · diff ↗
R
R 3.6.0 released · 2019-04-26
2018.09.04
2018-09-10 · diff ↗
R
R 3.5.0 released · 2018-04-23
2017.12.08
2017-12-08 · diff ↗

Show 4 earlier events

2017.07.11
2017-07-12 · diff ↗
2017.06.14
2017-06-20 · diff ↗
2017.05.08
2017-06-08
R
R 3.4.0 released · 2017-04-21

Package metadata

First published: 2017-06-08
Total releases: 10 / 9 yrs
License: GPL-3 OSI
Download size: 2.7 MB
Installed size: not tracked yet
With dependencies: not tracked yet

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