octopucs

0.1.1

Statistical Support for Hierarchical Clusters

0packages depend

1.9Kdownloads / year

–test coverage

13/13checks pass

Overview

About

Maintained by Roger GuevaraFirst published 2024-07-282 releasesCRAN page ↗

Generates n hierarchical clustering hypotheses on subsets of classifiers (usually species in community ecology studies). The n clustering hypotheses are combined to generate a generalized cluster, and computes three metrics of support. 1) The average proportion of elements conforming the group in each of the n clusters (integrity). And 2) the contamination, i.e., the average proportion of elements from other groups that enter a focal group. 3) The probability of existence of the group gives the integrity and contamination in a Bayesian approach.

Install

R (CRAN)Ubuntu (r2u)openSUSE (OBS)

install.packages("octopucs", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-octopucs

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-octopucs

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

13OK

Slowest check: 2.1 min · r-devel-linux-x86_64-fedora-clang

Check history

OK2026-03-10
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

Documentation signals are not tracked yet for this package.

Downloads

1.9K

CRAN downloads in the past year

Rank #22,626 · ~5/day · ~155/mo

octopucs Releases R versions

Daily download trend is not available in this view yet.

15630 days

49890 days

1.9K1 year

Compare downloads with other packages →

Also on93 r2u12 autocran

Dependencies

Declared dependencies

3 external dependencies (excludes base and recommended)

Depends (3)

vegan stringr progress

Imports (0)

none

LinkingTo (0)

none

Suggests (0)

none

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

People & History

People (2)

Maintainer (1)

Roger Guevara

Author, Maintainer

Authors (2)

Roger Guevara

Author, Maintainer

Ian MacGregor-Fors

Author

Package Timeline

2 releases. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11
0.1.1Latest
2024-08-17 · current release · diff ↗
0.1.0
2024-07-28
R
R 4.4.0 released · 2024-04-24

Package metadata

First published: 2024-07-28
Total releases: 2 / 2 yrs
License: GPL-3 OSI
Download size: 11 KB
Installed size: not tracked yet
With dependencies: not tracked yet

Report a problem with this page →