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multimedia

Multimodal Mediation Analysis

v0.2.0 · Sep 18, 2024 · CC0

Description

Multimodal mediation analysis is an emerging problem in microbiome data analysis. Multimedia make advanced mediation analysis techniques easy to use, ensuring that all statistical components are transparent and adaptable to specific problem contexts. The package provides a uniform interface to direct and indirect effect estimation, synthetic null hypothesis testing, bootstrap confidence interval construction, and sensitivity analysis. More details are available in Jiang et al. (2024) "multimedia: Multimodal Mediation Analysis of Microbiome Data" <doi:10.1101/2024.03.27.587024>.

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9 NOTE
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r-devel-linux-x86_64-debian-clang ERROR
r-devel-linux-x86_64-debian-gcc NOTE
r-devel-linux-x86_64-fedora-clang NOTE
r-devel-linux-x86_64-fedora-gcc NOTE
r-devel-macos-arm64 NOTE
r-devel-windows-x86_64 NOTE
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 ERROR
r-release-linux-x86_64 NOTE
r-release-macos-arm64 NOTE
r-release-macos-x86_64 NOTE
r-release-windows-x86_64 NOTE
Check details (14 non-OK)
ERROR r-devel-linux-x86_64-debian-clang

package dependencies

Packages required but not available: 'SummarizedExperiment', 'phyloseq'

See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
NOTE r-devel-linux-x86_64-debian-gcc

DESCRIPTION meta-information

  Missing dependency on R >= 4.2.0 because package code uses the pipe
  placeholder syntax added in R 4.2.0.
  File(s) using such syntax:
    ‘predict.R’ ‘sensitivity.R’ ‘treatment_profile.R’
NOTE r-devel-linux-x86_64-fedora-clang

DESCRIPTION meta-information

  Missing dependency on R >= 4.2.0 because package code uses the pipe
  placeholder syntax added in R 4.2.0.
  File(s) using such syntax:
    ‘predict.R’ ‘sensitivity.R’ ‘treatment_profile.R’
NOTE r-devel-linux-x86_64-fedora-gcc

DESCRIPTION meta-information

  Missing dependency on R >= 4.2.0 because package code uses the pipe
  placeholder syntax added in R 4.2.0.
  File(s) using such syntax:
    ‘predict.R’ ‘sensitivity.R’ ‘treatment_profile.R’
NOTE r-devel-macos-arm64

DESCRIPTION meta-information

  Missing dependency on R >= 4.2.0 because package code uses the pipe
  placeholder syntax added in R 4.2.0.
  File(s) using such syntax:
    ‘predict.R’ ‘sensitivity.R’ ‘treatment_profile.R’
NOTE r-devel-windows-x86_64

DESCRIPTION meta-information

  Missing dependency on R >= 4.2.0 because package code uses the pipe
  placeholder syntax added in R 4.2.0.
  File(s) using such syntax:
    'predict.R' 'sensitivity.R' 'treatment_profile.R'
OK r-oldrel-macos-arm64

*


            
OK r-oldrel-macos-x86_64

*


            
OK r-oldrel-windows-x86_64

*


            
ERROR r-patched-linux-x86_64

package dependencies

Package required but not available: ‘phyloseq’

See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
NOTE r-release-linux-x86_64

DESCRIPTION meta-information

  Missing dependency on R >= 4.2.0 because package code uses the pipe
  placeholder syntax added in R 4.2.0.
  File(s) using such syntax:
    ‘predict.R’ ‘sensitivity.R’ ‘treatment_profile.R’
NOTE r-release-macos-arm64

DESCRIPTION meta-information

  Missing dependency on R >= 4.2.0 because package code uses the pipe
  placeholder syntax added in R 4.2.0.
  File(s) using such syntax:
    ‘predict.R’ ‘sensitivity.R’ ‘treatment_profile.R’
NOTE r-release-macos-x86_64

DESCRIPTION meta-information

  Missing dependency on R >= 4.2.0 because package code uses the pipe
  placeholder syntax added in R 4.2.0.
  File(s) using such syntax:
    ‘predict.R’ ‘sensitivity.R’ ‘treatment_profile.R’
NOTE r-release-windows-x86_64

DESCRIPTION meta-information

  Missing dependency on R >= 4.2.0 because package code uses the pipe
  placeholder syntax added in R 4.2.0.
  File(s) using such syntax:
    'predict.R' 'sensitivity.R' 'treatment_profile.R'

Check History

ERROR 3 OK · 9 NOTE · 0 WARNING · 2 ERROR · 0 FAILURE Mar 9, 2026
ERROR r-devel-linux-x86_64-debian-clang

package dependencies

Packages required but not available: 'SummarizedExperiment', 'phyloseq'

See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
NOTE r-devel-linux-x86_64-debian-gcc

DESCRIPTION meta-information

  Missing dependency on R >= 4.2.0 because package code uses the pipe
  placeholder syntax added in R 4.2.0.
  File(s) using such syntax:
    ‘predict.R’ ‘sensitivity.R’ ‘treatment_profile.R’
NOTE r-devel-linux-x86_64-fedora-clang

DESCRIPTION meta-information

  Missing dependency on R >= 4.2.0 because package code uses the pipe
  placeholder syntax added in R 4.2.0.
  File(s) using such syntax:
    ‘predict.R’ ‘sensitivity.R’ ‘treatment_profile.R’
NOTE r-devel-linux-x86_64-fedora-gcc

DESCRIPTION meta-information

  Missing dependency on R >= 4.2.0 because package code uses the pipe
  placeholder syntax added in R 4.2.0.
  File(s) using such syntax:
    ‘predict.R’ ‘sensitivity.R’ ‘treatment_profile.R’
NOTE r-devel-macos-arm64

DESCRIPTION meta-information

  Missing dependency on R >= 4.2.0 because package code uses the pipe
  placeholder syntax added in R 4.2.0.
  File(s) using such syntax:
    ‘predict.R’ ‘sensitivity.R’ ‘treatment_profile.R’
NOTE r-devel-windows-x86_64

DESCRIPTION meta-information

  Missing dependency on R >= 4.2.0 because package code uses the pipe
  placeholder syntax added in R 4.2.0.
  File(s) using such syntax:
    'predict.R' 'sensitivity.R' 'treatment_profile.R'
ERROR r-patched-linux-x86_64

package dependencies

Package required but not available: ‘phyloseq’

See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
NOTE r-release-linux-x86_64

DESCRIPTION meta-information

  Missing dependency on R >= 4.2.0 because package code uses the pipe
  placeholder syntax added in R 4.2.0.
  File(s) using such syntax:
    ‘predict.R’ ‘sensitivity.R’ ‘treatment_profile.R’
NOTE r-release-macos-arm64

DESCRIPTION meta-information

  Missing dependency on R >= 4.2.0 because package code uses the pipe
  placeholder syntax added in R 4.2.0.
  File(s) using such syntax:
    ‘predict.R’ ‘sensitivity.R’ ‘treatment_profile.R’
NOTE r-release-macos-x86_64

DESCRIPTION meta-information

  Missing dependency on R >= 4.2.0 because package code uses the pipe
  placeholder syntax added in R 4.2.0.
  File(s) using such syntax:
    ‘predict.R’ ‘sensitivity.R’ ‘treatment_profile.R’
NOTE r-release-windows-x86_64

DESCRIPTION meta-information

  Missing dependency on R >= 4.2.0 because package code uses the pipe
  placeholder syntax added in R 4.2.0.
  File(s) using such syntax:
    'predict.R' 'sensitivity.R' 'treatment_profile.R'

Dependency Network

Dependencies Reverse dependencies brms glmnetUtils ranger tidyselect MASS S4Vectors SummarizedExperiment cli dplyr fansi formula.tools ggplot2 glue miniLNM patchwork +6 more dependencies multimedia

Version History

new 0.2.0 Mar 9, 2026