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miRtest

Combined miRNA- And mRNA-Testing

v2.2 · Nov 22, 2025 · GPL

Description

Package for combined miRNA- and mRNA-testing.

Downloads

CRAN

305

Last 30 days

15157th

693

Last 90 days

2.7K

Last year

Trend: +58% (30d vs prior 30d)

r2u CRAN

0

Last 30 days

25

Last 90 days

116

Last year

Trend: -100% (30d vs prior 30d)

CRAN Check Status

13 OK
Show all 13 flavors
Flavor Status
r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK

Check History

OK 13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Jun 27, 2026
ERROR 12 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Jun 21, 2026
ERROR r-release-linux-x86_64

package dependencies

Packages required but not available: 'globaltest', 'GlobalAncova'

See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
OK 13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Jun 9, 2026
ERROR 12 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Jun 8, 2026
ERROR r-devel-linux-x86_64-debian-gcc

package dependencies

Packages required but not available: 'globaltest', 'GlobalAncova'

See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
OK 13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE May 20, 2026
WARNING 12 OK · 0 NOTE · 1 WARNING · 0 ERROR · 0 FAILURE May 19, 2026
WARNING r-devel-linux-x86_64-fedora-gcc

S3 generic/method consistency

Error: there is no package called ‘statmod’
Call sequence:
9: doWithOneRestart(return(expr), restart)
8: withOneRestart(expr, restarts[[1L]])
7: withRestarts(stop(cond), retry_loadNamespace = function() NULL)
6: loadNamespace(j <- i[[1L]], c(lib.loc,
...[truncated]...
])
2: namespaceImport(ns, loadNamespace(i, c(lib.loc, .libPaths()), 
       versionCheck = vI[[i]]), from = package)
1: loadNamespace(package, lib.loc)
Execution halted
See section ‘Generic functions and methods’ in the ‘Writing R
Extensions’ manual.
OK 12 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Apr 25, 2026
WARNING 13 OK · 0 NOTE · 1 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026
WARNING r-oldrel-macos-arm64

loading without being on the library search path

Loading required package: corpcor
Loading required package: MASS
Error: package or namespace load failed for ‘miRtest’ in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]):
 there is no package called ‘S7’
Execution halted

It looks like this package has a loading problem when not on .libPaths:
see the messages for details.

Code

Structure

Lines of code

1,367

Files

25

Compiled share

0%

Has compiled src

No

Language breakdown

R 633 (46.3%)Docs 472 (34.5%)Vignettes 262 (19.2%)

API

Exported functions

3

Internal functions

6

Testing & CI

Has tests

No

Test-to-code ratio

0.00

testthat edition

CI present

No

CI type

[]

PR gated

No

Docs

Return-value doc rate

100%

\dontrun example ratio

0%

Roxygen coverage

100%

Has pkgdown

No

NEWS present

No

Health & Security signals

Informational signals; not verdicts.

on.exit coverage

0%

Unsafe pattern score

0

Dep constraint coverage

0%

Secret pattern count

0

Bundled 3rd-party code

2 items

Portability & License

Min R version

System requirements

C++ standard

License

GPL

License flags

not SPDX, not OSI

History

Versions

12

First release

2011-03-26

Latest release

2025-11-22

Avg cadence

246 days

Cold removal rate

Dep drift

1

LOC over versions

v1.0: 1,098 LOCv1.1: 1,098 LOCv1.2: 993 LOCv1.5: 1,001 LOCv1.3: 993 LOCv1.4: 993 LOCv1.6: 1,264 LOCv1.7: 1,264 LOCv1.8: 1,264 LOCv2.0: 1,239 LOCv2.1: 1,239 LOCv2.2: 1,367 LOC

Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/cran-code-metrics.

Dependency Network

Dependencies Reverse dependencies corpcor MASS globaltest GlobalAncova limma miRtest

Version History

13 tracked
new 2.2 Mar 10, 2026
updated 2.2 ← 2.1 diff Nov 21, 2025
updated 2.1 ← 2.0 diff Feb 4, 2024
updated 2.0 ← 1.8 diff May 22, 2022
updated 1.8 ← 1.7 diff Nov 26, 2014
updated 1.7 ← 1.6 diff Jun 29, 2014
updated 1.6 ← 1.5 diff Mar 24, 2014
updated 1.5 ← 1.4 diff Mar 20, 2013
updated 1.4 ← 1.3 diff Jul 2, 2012
updated 1.3 ← 1.2 diff Jul 1, 2012
updated 1.2 ← 1.1 diff Mar 5, 2012
updated 1.1 ← 1.0 diff May 28, 2011
new 1.0 Mar 26, 2011