maGUI

4.0

A Graphical User Interface for Microarray Data Analysis and Annotation

0packages depend

2.9Kdownloads / year

–test coverage

9/9checks pass

Overview

About

Maintained by Dhammapal BharneFirst published 2015-10-128 releasesCRAN page ↗

Provides a comprehensive graphical user interface for analysis of Affymetrix, Agilent, Illumina, Nimblegen and other microarray data. It can perform miscellaneous tasks such as gene set enrichment and test analyses, identifying gene symbols and building co-expression network. It can also estimate sample size for atleast two-fold expression change. The current version is its slenderized form for compatable and flexible implementation.

Install

R (CRAN)Ubuntu (r2u)

install.packages("maGUI", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-magui

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

Health

CRAN checks

9OK

Slowest check: 1.4 min · r-devel-linux-x86_64-fedora-clang

Code health

None

Tests · ratio 0.00

not tracked

Coverage

None

Vignettes

README

Dependencies · direct

Check history

OK2026-04-25
8 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
NOTE2026-03-10
8 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Downloads

2.9K

CRAN downloads in the past year

Rank #14,960 · ~8/day · ~245/mo

maGUI Releases R versions

Daily download trend is not available in this view yet.

30730 days

74190 days

2.9K1 year

Compare downloads with other packages →

Also on101 r2u26 c2d4u

Dependencies

Declared dependencies

27 external dependencies (excludes base and recommended)

Depends (0)

none

Imports (4)

tcltkgrDevicesutilsBiobase

LinkingTo (0)

none

Suggests (29)

tkrplot gWidgets2 Rgraphviz ssize Biostrings BiocManager RSQLite GEOquery GEOmetadb RBGL WGCNA KEGGREST KEGGgraph pdInfoBuilder lumi oligo graph affy genefilter beadarray GOstats GO.db Category annotate impute limmagraphicsmethodsstats

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

Code Composition

R 703 (95%)Rd 37 (5%)

Code characteristics

Cyclomatic complexity: 4.0 median / 4 max
System requirements: 1 external

Test coverage

Line coverage

–

Expression

–

Tests / Examples

–

Functions

1 0 exported

Complexity

4 avg / 4 max

Call network

1 nodes / 0 edges

Test coverage has not been measured for this package yet; nodes fall back to a neutral fill.

Call graph

Open call graph →

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Lowest coverage

Per-function coverage is not measured for this package yet.

People & History

People (0)

Author records are not tracked yet for this package.

Release timeline

8 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
R
R 4.3.0 released · 2023-04-21
R
R 4.2.0 released · 2022-04-22
4.0Latest
2022-04-12 · current release · diff ↗
R
R 4.1.0 released · 2021-05-18
3.0
2020-11-13 · diff ↗
2.4
2020-05-18 · diff ↗
R
R 4.0.0 released · 2020-04-24
R
R 3.6.0 released · 2019-04-26
2.3
2019-03-21 · diff ↗
R
R 3.5.0 released · 2018-04-23
R
R 3.4.0 released · 2017-04-21
2.2
2017-03-04 · diff ↗
2.1
2017-02-16 · diff ↗

Show 4 earlier events

2.0
2017-01-11 · diff ↗
R
R 3.3.0 released · 2016-05-03
1.0
2015-10-12
R
R 3.2.0 released · 2015-04-16

Package metadata

First published: 2015-10-12
Total releases: 8 / 11 yrs
License: GPL-2 OSI
Download size: 84 KB
Installed size: not tracked yet
With dependencies: not tracked yet