lmeresampler

0.2.4

Bootstrap Methods for Nested Linear Mixed-Effects Models

2packages depend

11.1Kdownloads / year

62.5%test coverage

0/13checks pass

Overview

About

Maintained by Adam LoyFirst published 2016-07-157 releasesCRAN page ↗GitHub ↗

Bootstrap routines for nested linear mixed effects models fit using either 'lme4' or 'nlme'. The provided 'bootstrap()' function implements the parametric, residual, cases, random effect block (REB), and wild bootstrap procedures. An overview of these procedures can be found in Van der Leeden et al. (2008) <doi: 10.1007/978-0-387-73186-5_11>, Carpenter, Goldstein & Rasbash (2003) <doi: 10.1111/1467-9876.00415>, and Chambers & Chandra (2013) <doi: 10.1080/10618600.2012.681216>.

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("lmeresampler", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("aloy/lmeresampler")

Development version from aloy/lmeresampler. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-lmeresampler

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-lmeresampler

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-lmeresampler

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

13NOTE

Failing flavors

NOTE r-devel-linux-x86_64-debian-clang
NOTE r-devel-linux-x86_64-debian-gcc
NOTE r-devel-linux-x86_64-fedora-clang
NOTE r-devel-linux-x86_64-fedora-gcc
NOTE r-devel-windows-x86_64
NOTE r-oldrel-macos-arm64
NOTE r-oldrel-macos-x86_64
NOTE r-oldrel-windows-x86_64
NOTE r-patched-linux-x86_64
NOTE r-release-linux-x86_64
NOTE r-release-macos-arm64
NOTE r-release-macos-x86_64
NOTE r-release-windows-x86_64

Slowest check: 3.5 min · r-devel-linux-x86_64-fedora-clang

Code health

Yes

Tests · ratio 0.99

62.5%

Coverage · measured lines

91%

Documentation · exports

Dependencies · direct

Check history

NOTE2026-06-09
0 OK · 13 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-06-08
0 OK · 12 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
NOTE2026-03-10
0 OK · 14 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMEYes · 361 wordsVignettesYes · dynamicpkgdown siteNoNEWSYes · 100% structuredCode of conductNoContributing guideNo

Examples that run: 50%
Documented parameters: 100%
Return-value docs: 80%
References docs: 44%

Downloads

11.1K

CRAN downloads in the past year

Rank #5,302 · ~31/day · ~928/mo

Releases R versions

Daily download trend is not available in this view yet.

51030 days

1.8K90 days

11.1K1 year

Compare downloads with other packages →

Also on124 r2u24 autocran52 c2d4u

Repository

GitHub ↗ aloy/lmeresampler

39Stars

5Forks

8Open issues

0Open PRs

3Releases

798Commits

9Contributors

798 commits · Last activity 2024-07-19 · +5.4% stars, 30d

Stars over time

2025-06-24 · 362026-07-07 · 39

Repository practices

Upstream repositoryBeta

5 development-tooling and community-health practices detected across 3 families in the upstream repository

Checks run against github.com/aloy/lmeresampler on 2026-07-19.

Continuous integration (1)

GitHub Actions

CRAN release process (3)

cran-comments.mdrevdep/CRAN-SUBMISSION

Docs source (1)

README.Rmd

How this is detected·Detection ruleset v1 (2026-07-18)

Dependencies

Declared dependencies

18 external dependencies (excludes base and recommended)

Depends (1)

R >= 3.5.0

Imports (13)

dplyrMatrixnlmeU ggplot2 ggdist HLMdiag purrr forcatsstatsstatmod tidyr magrittr tibble

LinkingTo (0)

none

Suggests (8)

lme4nlmetestthat mlmRev knitr rmarkdown doParallel foreach

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

2direct

1indirect

fastFMM varTestnlme

Code & Tests

Code Composition

R 5,257 (79%)Rd 972 (15%)Vignettes 402 (6%)

Code characteristics

Object systems

S321

Cyclomatic complexity: 2.0 median / 15 max
Test cases: 103 / 0.99 per code line

Test coverage

Line coverage

62%

Expression

61.2%

Tests / Examples

62.5% / – ex

Functions

67 10 exported

Complexity

3.3 avg / 15 max

Call network

67 nodes / 79 edges

Call graph

Open call graph →

Loading call graph…

Lowest coverage

67 functions

Function	Cyclo	Coverage
bootstrap_pvals exp	4	0%
combine_lmeresamp exp	1	0%
combine_pvals exp	1	0%
.basic_ci	2	0%
.norm_ci	2	0%
.perc_ci	2	0%

Datasets

Bundled datasets · 1

Name	Class	Rows × Cols	Also ships in
jsp728	data.frame	728 × 9	–

People & History

People (3)

Maintainer (1)

Adam Loy

Author, Maintainer

Authors (3)

Adam Loy

Author, Maintainer

Jenna Korobova

Author · added in 0.2.0

Spenser Steele

Author

Package Timeline

7 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
R
R 4.3.0 released · 2023-04-21
0.2.4Latest
2023-02-11 · current release · diff ↗
0.2.3
2023-01-30 · diff ↗
0.2.2
2022-04-30 · diff ↗
R
R 4.2.0 released · 2022-04-22
0.2.1
2022-03-23 · diff ↗
unarchivedReturned to CRAN
2022-03-23
archivedRemoved from CRAN
2022-02-24
requires archived package 'catchr'
R
R 4.1.0 released · 2021-05-18
0.2.0
2021-05-01 · diff ↗
R
R 4.0.0 released · 2020-04-24
0.1.1
2020-01-31 · diff ↗
unarchivedReturned to CRAN
2020-01-31

Show 6 earlier events

R
R 3.6.0 released · 2019-04-26
archivedRemoved from CRAN
2019-03-01
check problems were not corrected in time
R
R 3.5.0 released · 2018-04-23
R
R 3.4.0 released · 2017-04-21
0.1.0
2016-07-15
R
R 3.3.0 released · 2016-05-03

Package metadata

First published: 2016-07-15
Total releases: 7 / 10 yrs
License: GPL-3 OSI
Minimum R: ≥ 3.5.0
Bundled data: 7.8 KB / 1 file
Download size: 573 KB
Installed size: not tracked yet
With dependencies: not tracked yet

Appears in task views

Mixed, Multilevel, and Hierarchical Models in R

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