kernscr

1.0.7

Kernel Machine Score Test for Semi-Competing Risks

0packages depend

2.8Kdownloads / year

–test coverage

12/13checks pass

Overview

About

Maintained by Boris P HejblumFirst published 2016-05-036 releasesCRAN page ↗GitHub ↗

Kernel Machine Score Test for Pathway Analysis in the Presence of Semi-Competing Risks. Method is detailed in: Neykov, Hejblum & Sinnott (2018) <doi: 10.1177/0962280216653427>.

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("kernscr", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("borishejblum/kernscr")

Development version from borishejblum/kernscr. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-kernscr

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-kernscr

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-kernscr

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

1NOTE12OK

Failing flavors

NOTE r-devel-linux-x86_64-debian-gcc

Slowest check: 54 s · r-oldrel-windows-x86_64

Code health

None

Tests · ratio 0.00

not tracked

Coverage

100%

Documentation · exports

Dependencies · direct

Check history

NOTE2026-08-01
12 OK · 1 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
OK2026-03-10
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMEYes · 89 wordsVignettesNopkgdown siteNoNEWSYes · 33% structuredCode of conductNoContributing guideNo

Examples that run: 100%
Documented parameters: 81%
Return-value docs: 83%
References docs: 20%

Downloads

2.8K

CRAN downloads in the past year

Rank #16,724 · ~8/day · ~234/mo

Releases R versions

Daily download trend is not available in this view yet.

17930 days

64490 days

2.8K1 year

Compare downloads with other packages →

Also on105 r2u1 autocran

Repository

GitHub ↗ borishejblum/kernscr

0Stars

0Forks

0Open issues

0Open PRs

0Releases

License GPL-2.0 · Last activity 2025-07-26

Repository practices

Upstream repositoryBeta

4 development-tooling and community-health practices detected across 4 families in the upstream repository

Checks run against github.com/borishejblum/kernscr on 2026-07-31.

Continuous integration (1)

GitHub Actions

CRAN release process (1)

cran-comments.md

Docs source (1)

README.Rmd

Lint, format, editor (1)

RStudio project

How this is detected·Detection ruleset v1 (2026-07-18)

Dependencies

Declared dependencies

3 external dependencies (excludes base and recommended)

Depends (1)

R >= 3.0

Imports (4)

graphicsMASSmvtnormstats

LinkingTo (0)

none

Suggests (2)

readxl org.Hs.eg.db

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

People & History

People (3)

Maintainer (1)

Boris P Hejblum

Author, Maintainer

Authors (3)

Boris P Hejblum

Author, Maintainer

Matey Neykov

Author · added in 1.0.1

Jennifer A Sinnot

Author

Listed in earlier versions (14)

"Hejblum"

no longer listed · 1.0.0

"Neykov"

no longer listed · 1.0.0

"Sinnot"

no longer listed · 1.0.0

email = "bhejblum@hsph.harvard.edu")

no longer listed · 1.0.0

"cre")

no longer listed · 1.0.0

email = "jsinnott@stat.osu.edu"))

no longer listed · 1.0.0

email = "mneykov@gmail.com")) person("Jennifer A."

no longer listed · 1.0.0

c(person("Boris P."

no longer listed · 1.0.0

Package Timeline

6 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
1.0.7Latest
2025-07-24 · current release · diff ↗
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
R
R 4.3.0 released · 2023-04-21
1.0.6
2023-04-17 · diff ↗
R
R 4.2.0 released · 2022-04-22
R
R 4.1.0 released · 2021-05-18
R
R 4.0.0 released · 2020-04-24
1.0.5
2019-08-20 · diff ↗
R
R 3.6.0 released · 2019-04-26
R
R 3.5.0 released · 2018-04-23
R
R 3.4.0 released · 2017-04-21
1.0.3
2016-06-29 · diff ↗
1.0.1
2016-05-18 · diff ↗
1.0.0
2016-05-03

Show 2 earlier events

R
R 3.3.0 released · 2016-05-03
R
R 3.2.0 released · 2015-04-16

Package metadata

First published: 2016-05-03
Total releases: 6 / 10 yrs
License: GPL-2 | file LICENSE OSI
Minimum R: ≥ 3.0
Bundled data: 8.6 KB / 1 file
Download size: 39 KB
Installed size: not tracked yet
With dependencies: not tracked yet

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