invitroTKdata

0.0.2

In Vitro Toxicokinetic Data Processed with the 'invitroTKstats' Pipeline

0packages depend

1.8Kdownloads / year

–test coverage

11/13checks pass

Overview

About

Maintained by Caroline RingFirst published 2025-08-192 releasesCRAN page ↗GitHub ↗

A collection of datasets containing a variety of in vitro toxicokinetic measurements including -- but not limited to -- chemical fraction unbound in the presence of plasma (f_up), intrinsic hepatic clearance (Clint, uL/min/million hepatocytes), and membrane permeability for oral absorption (Caco2). The datasets provided by the package were processed and analyzed with the companion 'invitroTKstats' package.

Install

R (CRAN)pak (dev)Ubuntu (r2u)openSUSE (OBS)

install.packages("invitroTKdata", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("USEPA/invitroTKdata")

Development version from USEPA/invitroTKdata. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-invitrotkdata

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-invitroTKdata

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

2NOTE11OK

Failing flavors

NOTE r-devel-linux-x86_64-fedora-clang
NOTE r-devel-linux-x86_64-fedora-gcc

Slowest check: 53 s · r-oldrel-windows-x86_64

Code health

None

Tests · ratio 0.00

not tracked

Coverage

Dependencies · direct

Check history

NOTE2026-07-16
11 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
WARNING2026-07-15
10 OK · 2 NOTE · 1 WARNING · 0 ERROR · 0 FAILURE
NOTE2026-03-10
12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMEYes · 512 wordsVignettesNopkgdown siteNoNEWSYes · 100% structuredCode of conductNoContributing guideNo

Examples that run: not tracked
Documented parameters: not tracked
Return-value docs: not tracked
References docs: 100%

Downloads

1.8K

CRAN downloads in the past year

Rank #23,114 · ~5/day · ~147/mo

Releases R versions

Daily download trend is not available in this view yet.

15530 days

47190 days

1.8K1 year

Compare downloads with other packages →

Also on97 r2u33 autocran

Repository

GitHub ↗ usepa/invitrotkdata

0Stars

0Forks

0Open issues

0Open PRs

2Releases

28Commits

5Contributors

28 commits · Last activity 2026-04-07

Releases over time

2026-01-20 · 12026-07-07 · 2

Repository practices

Upstream repositoryBeta

3 development-tooling and community-health practices detected across 3 families in the upstream repository

Checks run against github.com/usepa/invitrotkdata on 2026-07-19.

CRAN release process (1)

cran-comments.md

Docs source (1)

README.Rmd

Lint, format, editor (1)

RStudio project

How this is detected·Detection ruleset v1 (2026-07-18)

Dependencies

Declared dependencies

1 external dependency (excludes base and recommended)

Depends (1)

R >= 3.5.0

Imports (1)

Rdpack

LinkingTo (0)

none

Suggests (0)

none

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

Datasets

People & History

People (9)

Maintainer (1)

Caroline Ring

Maintainer · added in 0.0.2

Authors (2)

Sarah E. Davidson-Fritz

Author

John Wambaugh

Author

Contributors (5)

Contributor

Contributor

Contributor

Contributor

Contributor

U.S. Federal Government

Package Timeline

2 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
0.0.2Latest
2026-02-13 · current release · diff ↗
0.0.1
2025-08-19
R
R 4.5.0 released · 2025-04-11

Package metadata

First published: 2025-08-19
Total releases: 2 / 1 yrs
License: MIT + file LICENSE OSI
Minimum R: ≥ 3.5.0
Bundled data: 975 KB / 4 files
Download size: 1.0 MB
Installed size: not tracked yet
With dependencies: not tracked yet

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