icmstate

0.2.0

Interval Censored Multi-State Models

0packages depend

2.1Kdownloads / year

45.9%test coverage

13/13checks pass

Overview

About

Maintained by Daniel GomonFirst published 2024-10-283 releasesCRAN page ↗

Allows for the non-parametric estimation of transition intensities in interval-censored multi-state models using the approach of Gomon and Putter (2024) doi:10.48550/arXiv.2409.07176 or Gu et al. (2023) doi:10.1093/biomet/asad073.

Install

R (CRAN)Ubuntu (r2u)openSUSE (OBS)

install.packages("icmstate", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-icmstate

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-icmstate

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

13OK

Slowest check: 12.6 min · r-devel-linux-x86_64-fedora-clang

Code health

Yes

Tests · ratio 0.17

45.9%

Coverage · measured lines

100%

Documentation · exports

Dependencies · direct

Check history

OK2026-05-20
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-05-19
12 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
OK2026-04-25
12 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-03-30
13 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
OK2026-03-10
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMEYes · 229 wordsVignettesYes · dynamicpkgdown siteNoNEWSYes · 100% structuredCode of conductNoContributing guideNo

Examples that run: 95%
Documented parameters: 100%
Return-value docs: 96%
References docs: 21%

Downloads

2.1K

CRAN downloads in the past year

Rank #20,998 · ~6/day · ~178/mo

Releases R versions

Daily download trend is not available in this view yet.

17930 days

54690 days

2.1K1 year

Compare downloads with other packages →

Also on426 r2u37 autocran

Dependencies

Declared dependencies

17 external dependencies (excludes base and recommended)

Depends (0)

none

Imports (10)

Rcpp mstate prodlim igraph checkmate ggplot2 deSolve msmsurvivalJOPS

LinkingTo (1)

Rcpp

Suggests (7)

testthat icenReg profvis knitr rmarkdown bookdown latex2exp

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

People & History

People (2)

Maintainer (1)

Daniel Gomon

Author, Maintainer

Authors (2)

Daniel Gomon

Author, Maintainer

Hein Putter

Author

Package Timeline

3 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
0.2.0Latest
2025-07-04 · current release · diff ↗
R
R 4.5.0 released · 2025-04-11
0.1.1
2024-11-09 · diff ↗
0.1.0
2024-10-28
R
R 4.4.0 released · 2024-04-24

Package metadata

First published: 2024-10-28
Total releases: 3 / 2 yrs
License: GPL (>= 2) OSI
Download size: 834 KB
Installed size: not tracked yet
With dependencies: not tracked yet

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