ggseg3d
Interactive 3D Brain Atlas Visualization
v2.0.0
·
Feb 20, 2026
·
MIT + file LICENSE
Description
Plot brain atlases as interactive 3D meshes using 'Three.js' via 'htmlwidgets', or render publication-quality static images through 'rgl' and 'rayshader'. A pipe-friendly API lets you map data onto brain regions, control camera angles, toggle region edges, overlay glass brains, and snapshot or ray-trace the result. Additional atlases are available through the 'ggsegverse' r-universe. Mowinckel & Vidal-Piñeiro (2020) <doi:10.1177/2515245920928009>.
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Show all 14 flavors
| Flavor | Status |
|---|---|
| r-devel-linux-x86_64-debian-clang | OK |
| r-devel-linux-x86_64-debian-gcc | OK |
| r-devel-linux-x86_64-fedora-clang | OK |
| r-devel-linux-x86_64-fedora-gcc | OK |
| r-devel-macos-arm64 | OK |
| r-devel-windows-x86_64 | OK |
| r-oldrel-macos-arm64 | OK |
| r-oldrel-macos-x86_64 | OK |
| r-oldrel-windows-x86_64 | ERROR |
| r-patched-linux-x86_64 | OK |
| r-release-linux-x86_64 | OK |
| r-release-macos-arm64 | OK |
| r-release-macos-x86_64 | OK |
| r-release-windows-x86_64 | OK |
Check details (14 non-OK)
OK
r-devel-linux-x86_64-debian-clang
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OK
r-devel-linux-x86_64-debian-gcc
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OK
r-devel-linux-x86_64-fedora-clang
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OK
r-devel-linux-x86_64-fedora-gcc
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OK
r-devel-macos-arm64
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OK
r-devel-windows-x86_64
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r-oldrel-macos-arm64
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OK
r-oldrel-macos-x86_64
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ERROR
r-oldrel-windows-x86_64
re-building of vignette outputs
Error(s) in re-building vignettes: --- re-building 'ggseg3d.Rmd' using rmarkdown File img/intro-basic.png not found in resource path Error: processing vignette 'ggseg3d.Rmd' failed with diagnostics: pandoc document conversion failed with error 99 --- failed re-building 'ggseg3d.Rmd' --- re-building 'shiny.Rmd' using rmarkdown --- finished re-building 'shiny.Rmd' SUMMARY: processing the following file failed: 'ggseg3d.Rmd' Error: Vignette re-building failed. Execution halted
OK
r-patched-linux-x86_64
*
OK
r-release-linux-x86_64
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OK
r-release-macos-arm64
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OK
r-release-macos-x86_64
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OK
r-release-windows-x86_64
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Check History
ERROR 13 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Mar 9, 2026
ERROR
r-oldrel-windows-x86_64
re-building of vignette outputs
Error(s) in re-building vignettes: --- re-building 'ggseg3d.Rmd' using rmarkdown File img/intro-basic.png not found in resource path Error: processing vignette 'ggseg3d.Rmd' failed with diagnostics: pandoc document conversion failed with error 99 --- failed re-building 'ggseg3d.Rmd' --- re-building 'shiny.Rmd' using rmarkdown --- finished re-building 'shiny.Rmd' SUMMARY: processing the following file failed: 'ggseg3d.Rmd' Error: Vignette re-building failed. Execution halted
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2.0.0
Mar 9, 2026