genemodel

1.1.0

Gene Model Plotting in R

0packages depend

2.3Kdownloads / year

–test coverage

13/13checks pass

Overview

About

Maintained by J Grey MonroeFirst published 2016-05-182 releasesCRAN page ↗GitHub ↗

Using simple input, this package creates plots of gene models. Users can create plots of alternatively spliced gene variants and the positions of mutations and other gene features.

Install

R (CRAN)pak (dev)Ubuntu (r2u)openSUSE (OBS)

install.packages("genemodel", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("greymonroe/genemodel")

Development version from greymonroe/genemodel. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-genemodel

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-genemodel

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

13OK

Slowest check: 1.0 min · r-release-macos-x86_64

Code health

None

Tests · ratio 0.00

not tracked

Coverage

100%

Documentation · exports

Dependencies · direct

Check history

OK2026-03-10
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMEYes · 45 wordsVignettesYes · dynamicpkgdown siteNoNEWSYes · 0% structuredCode of conductNoContributing guideNo

Examples that run: 100%
Documented parameters: 100%
Return-value docs: 0%
References docs: 0%

Downloads

2.3K

CRAN downloads in the past year

Rank #21,274 · ~6/day · ~190/mo

Releases R versions

Daily download trend is not available in this view yet.

17630 days

53890 days

2.3K1 year

Compare downloads with other packages →

Also on96 r2u27 autocran1.4K conda_forge190 bioconda

Repository

GitHub ↗ greymonroe/genemodel

4Stars

1Forks

0Open issues

0Open PRs

0Releases

20Commits

1Contributors

20 commits · Last activity 2017-02-20

Stars over time

2024-01-10 · 42026-07-07 · 4

Repository practices

Upstream repositoryBeta

3 development-tooling and community-health practices detected across 3 families in the upstream repository

Checks run against github.com/greymonroe/genemodel on 2026-07-26.

CRAN release process (1)

cran-comments.md

Docs source (1)

README.Rmd

Lint, format, editor (1)

RStudio project

How this is detected·Detection ruleset v1 (2026-07-18)

Dependencies

Declared dependencies

3 external dependencies (excludes base and recommended)

Depends (1)

R >= 3.2.5

Imports (1)

stringr

LinkingTo (0)

none

Suggests (2)

knitr rmarkdown

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

Datasets

People & History

People (1)

Maintainer (1)

J Grey Monroe

Author, Maintainer

Authors (1)

J Grey Monroe

Author, Maintainer

Package Timeline

2 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
R
R 4.3.0 released · 2023-04-21
R
R 4.2.0 released · 2022-04-22
R
R 4.1.0 released · 2021-05-18
R
R 4.0.0 released · 2020-04-24
R
R 3.6.0 released · 2019-04-26
R
R 3.5.0 released · 2018-04-23
R
R 3.4.0 released · 2017-04-21
1.1.0Latest
2017-02-20 · current release · diff ↗
1.0.0.0
2016-05-18
R
R 3.3.0 released · 2016-05-03

Package metadata

First published: 2016-05-18
Total releases: 2 / 10 yrs
License: GPL-2 OSI
Minimum R: ≥ 3.2.5
Bundled data: 0.4 KB / 1 file
Download size: 111 KB
Installed size: not tracked yet
With dependencies: not tracked yet

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