fundiversity

1.1.1

Easy Computation of Functional Diversity Indices

2packages depend

6.9Kdownloads / year

97.5%test coverage

13/13checks pass

Overview

About

Maintained by Matthias GreniéFirst published 2021-02-155 releasesCRAN page ↗GitHub ↗

Computes six functional diversity indices. These are namely, Functional Divergence (FDiv), Function Evenness (FEve), Functional Richness (FRic), Functional Richness intersections (FRic_intersect), Functional Dispersion (FDis), and Rao's entropy (Q) (reviewed in Villéger et al. 2008 doi:10.1890/07-1206.1). Provides efficient, modular, and parallel functions to compute functional diversity indices (preprint: doi:10.32942/osf.io/dg7hw).

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("fundiversity", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("funecology/fundiversity")

Development version from funecology/fundiversity. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-fundiversity

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-fundiversity

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-fundiversity

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

13OK

Slowest check: 2.6 min · r-devel-linux-x86_64-fedora-clang

Code health

Yes

Tests · ratio 1.22

97.5%

Coverage · measured lines

100%

Documentation · exports

Dependencies · direct

Check history

OK2026-04-10
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-04-09
13 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
OK2026-03-10
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMEYes · 714 wordsVignettesYes · dynamicpkgdown siteNoNEWSYes · 100% structuredCode of conductNoContributing guideNo

Examples that run: 100%
Documented parameters: 100%
Return-value docs: 100%
References docs: 45%

Downloads

6.9K

CRAN downloads in the past year

Rank #8,098 · ~19/day · ~572/mo

Releases R versions

Daily download trend is not available in this view yet.

41230 days

1.3K90 days

6.9K1 year

Compare downloads with other packages →

Also on119 r2u

Repository

GitHub ↗ funecology/fundiversity

44Stars

2Forks

6Open issues

4Open PRs

7Releases

344Commits

6Contributors

rr-packagefunctional-ecologyfunctional-diversitybiodiversitybiodiversity-indicatorsbiodiversity-informaticsfunctional-trait

License GPL-3.0 · 344 commits · Last activity 2026-07-13 · +2.3% stars, 30d

Stars over time

2025-05-06 · 382026-07-07 · 44

Repository practices

Upstream repositoryBeta

7 development-tooling and community-health practices detected across 6 families in the upstream repository

Checks run against github.com/funecology/fundiversity on 2026-07-30.

Continuous integration (1)

GitHub Actions

Reproducibility and dev environment (1)

data-raw/

CRAN release process (1)

cran-comments.md

Docs source (1)

README.Rmd

Show all practices

Research and citation (2)

CITATION.cffZenodo

Lint, format, editor (1)

RStudio project

How this is detected·Detection ruleset v1 (2026-07-18)

Dependencies

Declared dependencies

8 external dependencies (excludes base and recommended)

Depends (1)

R >= 2.10

Imports (4)

future.apply geometryMatrixvegan

LinkingTo (0)

none

Suggests (5)

future knitr memoise rmarkdown testthat

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

2direct

0indirect

tidyttmoment funbiogeo

Code & Tests

People & History

People (2)

Maintainer (1)

Matthias Grenié

Author, Maintainer

Authors (2)

Matthias Grenié

Author, Maintainer

Hugo Gruson

Author

Package Timeline

5 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
R
R 4.3.0 released · 2023-04-21
1.1.1Latest
2022-11-21 · current release · diff ↗
1.0.0
2022-08-25 · diff ↗
R
R 4.2.0 released · 2022-04-22
0.2.1
2021-09-21 · diff ↗
R
R 4.1.0 released · 2021-05-18
0.2.0
2021-05-14 · diff ↗
0.0.1
2021-02-15
R
R 4.0.0 released · 2020-04-24

Package metadata

First published: 2021-02-15
Total releases: 5 / 5 yrs
License: GPL-3 OSI
Minimum R: ≥ 2.10
Bundled data: 18 KB / 4 files
Download size: 484 KB
Installed size: not tracked yet
With dependencies: not tracked yet

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