enmpa

0.2.5

Ecological Niche Modeling using Presence-Absence Data

1packages depend

4.9Kdownloads / year

–test coverage

13/13checks pass

Overview

About

Maintained by Luis F. Arias-GiraldoFirst published 2023-12-019 releasesCRAN page ↗GitHub ↗

A set of tools to perform Ecological Niche Modeling with presence-absence data. It includes algorithms for data partitioning, model fitting, calibration, evaluation, selection, and prediction. Other functions help to explore signals of ecological niche using univariate and multivariate analyses, and model features such as variable response curves and variable importance. Unique characteristics of this package are the ability to exclude models with concave quadratic responses, and the option to clamp model predictions to specific variables. These tools are implemented following principles proposed in Cobos et al., (2022) doi:10.17161/bi.v17i.15985, Cobos et al., (2019) doi:10.7717/peerj.6281, and Peterson et al., (2008) doi:10.1016/j.ecolmodel.2007.11.008.

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("enmpa", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("Luisagi/enmpa")

Development version from Luisagi/enmpa. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-enmpa

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-enmpa

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-enmpa

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

13OK

Slowest check: 8.5 min · r-devel-linux-x86_64-fedora-clang

Code health

None

Tests · ratio 0.00

not tracked

Coverage

100%

Documentation · exports

Dependencies · direct

Check history

OK2026-04-22
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-04-18
13 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
OK2026-03-10
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMEYes · 1,181 wordsVignettesNopkgdown siteNoNEWSYes · 100% structuredCode of conductNoContributing guideNo

Examples that run: 100%
Documented parameters: 100%
Return-value docs: 95%
References docs: 0%

Downloads

4.9K

CRAN downloads in the past year

Rank #6,431 · ~13/day · ~410/mo

Releases R versions

Daily download trend is not available in this view yet.

47430 days

1.5K90 days

4.9K1 year

Compare downloads with other packages →

Also on486 r2u1 autocran

Repository

GitHub ↗ luisagi/enmpa

6Stars

4Forks

0Open issues

0Open PRs

0Releases

253Commits

5Contributors

License GPL-3.0 · 253 commits · Last activity 2026-06-25 · 0% stars, 30d

Stars over time

2025-01-30 · 52026-07-07 · 6

Repository practices

Upstream repositoryBeta

5 development-tooling and community-health practices detected across 4 families in the upstream repository

Checks run against github.com/luisagi/enmpa on 2026-07-30.

Continuous integration (1)

GitHub Actions

CRAN release process (2)

cran-comments.mdCRAN-SUBMISSION

Docs source (1)

README.Rmd

Lint, format, editor (1)

RStudio project

How this is detected·Detection ruleset v1 (2026-07-18)

Dependencies

Declared dependencies

8 external dependencies (excludes base and recommended)

Depends (1)

R >= 3.5.0

Imports (13)

doSNOW ellipse foreachgraphicsmethodsmgcvparallelRcpp snowstatsterrautilsvegan

LinkingTo (1)

Rcpp

Suggests (0)

none

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

1direct

0indirect

kuenm2

Code & Tests

Datasets

People & History

People (3)

Maintainer (1)

Luis F. Arias-Giraldo

Author, Maintainer

Authors (2)

Luis F. Arias-Giraldo

Author, Maintainer

Marlon E. Cobos

Author

Contributors (1)

A. Townsend Peterson

Contributor

Package Timeline

9 releases. Pick two to compare their code metrics. R releases are shown for context.

0.2.5Latest
2026-06-25 · current release · diff ↗
0.2.4
2026-05-28 · diff ↗
R
R 4.6.0 released · 2026-04-24
0.2.3
2026-01-26 · diff ↗
0.2.2
2025-12-14 · diff ↗
0.2.1
2025-06-12 · diff ↗
0.2.0
2025-04-29 · diff ↗
R
R 4.5.0 released · 2025-04-11
0.1.9
2024-12-20 · diff ↗
0.1.8
2024-06-19 · diff ↗
R
R 4.4.0 released · 2024-04-24
0.1.5
2023-12-01
R
R 4.3.0 released · 2023-04-21

Package metadata

First published: 2023-12-01
Total releases: 9 / 3 yrs
License: GPL (>= 3) OSI
Minimum R: ≥ 3.5.0
Bundled data: 603 KB / 4 files
Download size: 2.7 MB
Installed size: not tracked yet
With dependencies: not tracked yet

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