divo

1.0.2

Tools for Analysis of Diversity and Similarity in Biological Systems

0packages depend

7.5Kdownloads / year

–test coverage

13/13checks pass

Overview

About

Maintained by Maciej PietrzakFirst published 2015-01-296 releasesCRAN page ↗

A set of tools for empirical analysis of diversity (a number and frequency of different types in a population) and similarity (a number and frequency of shared types in two populations) in biological or ecological systems.

Install

R (CRAN)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("divo", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-divo

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-divo

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-divo

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

13OK

Slowest check: 2.0 min · r-oldrel-windows-x86_64

Code health

None

Tests · ratio 0.00

not tracked

Coverage

100%

Documentation · exports

Dependencies · direct

Check history

OK2026-03-10
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMENoVignettesYes · dynamicpkgdown siteNoNEWSNoCode of conductNoContributing guideNo

Examples that run: 100%
Documented parameters: 100%
Return-value docs: 0%
References docs: 100%

Downloads

7.5K

CRAN downloads in the past year

Rank #5,765 · ~21/day · ~625/mo

Releases R versions

Daily download trend is not available in this view yet.

37530 days

1.7K90 days

7.5K1 year

Compare downloads with other packages →

Also on485 r2u25 autocran

Dependencies

Declared dependencies

0 external dependencies (excludes base and recommended)

Depends (2)

R >= 4.0.0cluster

Imports (4)

grDevicesgraphicsstatsutils

LinkingTo (0)

none

Suggests (0)

none

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

Code Composition

C 3,155 (60%)R 1,010 (19%)Vignettes 666 (13%)Rd 440 (8%)

Code characteristics

Cyclomatic complexity: 7.0 median / 14 max

Test coverage

Line coverage

–

Expression

–

Tests / Examples

–

Functions

86 14 exported

Complexity

8.5 avg / 14 max

Call network

86 nodes / 100 edges

Call graph

Open call graph →

Loading call graph…

Lowest coverage

Per-function coverage is not measured for this package yet.

People & History

People (5)

Maintainer (1)

Maciej Pietrzak

Author, Maintainer

Authors (5)

Maciej Pietrzak

Author, Maintainer

Grzegorz Rempala

Author

Christoph Sadee

Author · added in 1.0.0

Michal Seweryn

Author

Cankun Wang

Author · added in 1.0.1

Package Timeline

6 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11
1.0.2Latest
2025-02-16 · current release · diff ↗
R
R 4.4.0 released · 2024-04-24
R
R 4.3.0 released · 2023-04-21
R
R 4.2.0 released · 2022-04-22
R
R 4.1.0 released · 2021-05-18
R
R 4.0.0 released · 2020-04-24
1.0.1
2019-12-17 · diff ↗
R
R 3.6.0 released · 2019-04-26
R
R 3.5.0 released · 2018-04-23
1.0.0
2017-10-18 · diff ↗
R
R 3.4.0 released · 2017-04-21
R
R 3.3.0 released · 2016-05-03
0.1.2
2016-01-07 · diff ↗
R
R 3.2.0 released · 2015-04-16

Show 3 earlier events

0.1.1
2015-02-03 · diff ↗
0.1
2015-01-29
R
R 3.1.0 released · 2014-04-10

Package metadata

First published: 2015-01-29
Total releases: 6 / 11 yrs
License: GPL (>= 3) OSI
Minimum R: ≥ 4.0.0
Bundled data: 35 KB / 1 file
Download size: 226 KB
Installed size: not tracked yet
With dependencies: not tracked yet

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