dineR

2.0.0

Differential Network Estimation in R

0packages depend

3Kdownloads / year

41.8%test coverage

12/13checks pass

Overview

About

Maintained by Ricardo Daniel Marques SalgadoFirst published 2021-11-033 releasesCRAN page ↗GitHub ↗

An efficient and convenient set of functions to perform differential network estimation through the use of alternating direction method of multipliers optimization with a variety of different loss functions.

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("dineR", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("RicSalgado/dineR")

Development version from RicSalgado/dineR. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-diner

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-dineR

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-dineR

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

1NOTE12OK

Failing flavors

NOTE r-devel-linux-x86_64-debian-gcc

Slowest check: 2.1 min · r-oldrel-macos-x86_64

Code health

Yes

Tests · ratio 0.07

41.8%

Coverage · measured lines

100%

Documentation · exports

Dependencies · direct

Check history

NOTE2026-08-01
12 OK · 1 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
OK2026-03-10
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMEYes · 400 wordsVignettesYes · dynamicpkgdown siteNoNEWSYes · 100% structuredCode of conductNoContributing guideNo

Examples that run: 100%
Documented parameters: 100%
Return-value docs: 100%
References docs: 100%

Downloads

CRAN downloads in the past year

Rank #10,983 · ~8/day · ~247/mo

Releases R versions

Daily download trend is not available in this view yet.

25530 days

92790 days

3K1 year

Compare downloads with other packages →

Also on99 r2u1 autocran

Repository

GitHub ↗ ricsalgado/diner

2Stars

2Forks

0Open issues

0Open PRs

0Releases

90Commits

2Contributors

90 commits · Last activity 2026-05-30

Stars over time

2023-05-17 · 22026-07-07 · 2

Repository practices

Upstream repositoryBeta

4 development-tooling and community-health practices detected across 4 families in the upstream repository

Checks run against github.com/ricsalgado/diner on 2026-07-31.

Continuous integration (1)

GitHub Actions

CRAN release process (1)

cran-comments.md

Lint, format, editor (1)

RStudio project

Governance and community (1)

Issue templates

How this is detected·Detection ruleset v1 (2026-07-18)

Dependencies

Declared dependencies

7 external dependencies (excludes base and recommended)

Depends (0)

none

Imports (6)

doSNOW foreachMASSMatrixparallelprogress

LinkingTo (0)

none

Suggests (4)

doParallel knitr rmarkdown testthat

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

People & History

People (3)

Maintainer (1)

Ricardo Daniel Marques Salgado

Author, Maintainer

Authors (1)

Ricardo Daniel Marques Salgado

Author, Maintainer

Contributors (2)

Mohammad Arashi

Contributor

Andriette Bekker

Contributor

Package Timeline

3 releases. Pick two to compare their code metrics. R releases are shown for context.

2.0.0Latest
2026-06-01 · current release · diff ↗
R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
R
R 4.3.0 released · 2023-04-21
R
R 4.2.0 released · 2022-04-22
1.0.1
2021-11-15 · diff ↗
1.0.0
2021-11-03
R
R 4.1.0 released · 2021-05-18

Package metadata

First published: 2021-11-03
Total releases: 3 / 5 yrs
License: MIT + file LICENSE OSI
Download size: 19 KB
Installed size: not tracked yet
With dependencies: not tracked yet

Report a problem with this page →