corncob

0.4.2

Count Regression for Correlated Observations with the Beta-Binomial

0packages depend

12.2Kdownloads / year

75.1%test coverage

13/13checks pass

Overview

About

Maintained by Amy D WillisFirst published 2021-03-116 releasesCRAN page ↗GitHub ↗

Statistical modeling for correlated count data using the beta-binomial distribution, described in Martin et al. (2020) doi:10.1214/19-AOAS1283. It allows for both mean and overdispersion covariates.

Install

R (CRAN)pak (dev)Ubuntu (r2u)openSUSE (OBS)

install.packages("corncob", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("statdivlab/corncob")

Development version from statdivlab/corncob. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-corncob

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-corncob

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

13OK

Slowest check: 8.0 min · r-devel-linux-x86_64-fedora-clang

Check history

OK2026-03-12
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-03-10
13 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE

Documentation

Documentation signals are not tracked yet for this package.

Downloads

12.2K

CRAN downloads in the past year

Rank #5,151 · ~33/day · ~1K/mo

corncob Releases R versions

Daily download trend is not available in this view yet.

61130 days

1.8K90 days

12.2K1 year

Compare downloads with other packages →

Also on198 r2u36 autocran1.2K bioconda

Repository

GitHub ↗ statdivlab/corncob

108Stars

24Forks

10Open issues

0Open PRs

1Releases

551Commits

13Contributors

551 commits · Last activity 2025-11-13 · 0% stars, 30d

Repository practices

Upstream repositoryBeta

5 development-tooling and community-health practices detected across 4 families in the upstream repository

Checks run against github.com/statdivlab/corncob on 2026-07-19.

Continuous integration (1)

GitHub Actions

Reproducibility and dev environment (1)

Dockerfile

CRAN release process (2)

cran-comments.mdCRAN-SUBMISSION

Lint, format, editor (1)

RStudio project

How this is detected·Detection ruleset v1 (2026-07-18)

Dependencies

Declared dependencies

18 external dependencies (excludes base and recommended)

Depends (1)

R >= 3.2

Imports (11)

statsutilsVGAM numDeriv ggplot2 trust dplyr magrittr detectseparation scales rlang

LinkingTo (0)

none

Suggests (9)

knitr rmarkdown testthat covr limma slam R.rsp optimx phyloseq

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

Datasets

People & History

People (6)

Maintainer (1)

Amy D Willis

Author, Maintainer

Authors (3)

Amy D Willis

Author, Maintainer

Bryan D Martin

Author

Daniela Witten

Author

Contributors (3)

Sarah Teichman

Contributor · added in 0.4.1

Xiangjie Xue

Contributor · added in 0.4.1

Thomas W Yee

Contributor · added in 0.4.1

Package Timeline

6 releases. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11
0.4.2Latest
2025-03-29 · current release · diff ↗
R
R 4.4.0 released · 2024-04-24
0.4.1
2024-01-10 · diff ↗
unarchivedReturned to CRAN
2024-01-10
archivedRemoved from CRAN
2023-10-29
requires archived package 'optimr'
0.3.2
2023-08-31 · diff ↗
R
R 4.3.0 released · 2023-04-21
0.3.1
2022-12-05 · diff ↗
0.3.0
2022-09-23 · diff ↗
unarchivedReturned to CRAN
2022-09-23
archivedRemoved from CRAN
2022-09-15
check problems were not corrected in time
R
R 4.2.0 released · 2022-04-22
R
R 4.1.0 released · 2021-05-18
0.2.0
2021-03-11

Show 1 earlier events

R
R 4.0.0 released · 2020-04-24

Package metadata

First published: 2021-03-11
Total releases: 6 / 5 yrs
License: GPL (>= 2) OSI
Download size: 2.0 MB
Installed size: not tracked yet
With dependencies: not tracked yet

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